Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq948 96.9 4e-15 >seq948 Length=99277 Score = 96.9 bits (106), Expect = 4e-15 Identities = 201/297 (68%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 |||||||||||| | | ||||| ||||| |||||||| ||| || ||||| Sbjct 85019 ACGTAGAACTGGGCGAACATATGGCACGGCGGAAGGGCCATCTTCTTCAGATCAGCCGGA 85078 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 ||||| ||| |||||| || | | | || | ||| || || | || |||| Sbjct 85079 TTCCATGCGCTGAGGATGATGCGGC-GATCATAGGGATTGTTCCGCAGCTTGTGAATCAC 85137 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048 || ||||| || |||||| || ||| |||||||| | |||||||| |||| Sbjct 85138 TTCAGCAAGCTGATCAACGCCCCTGCCTGTGTAGTCTGTCTTCGCATCCACGTATTCGGC 85197 Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108 ||||| || | ||| ||||| |||||||| || || || || ||| || | || Sbjct 85198 GCCGAAATGTCGCCATTGGAATCCGTAGACAGGGCCAAGATCGCCGACTTCACGATGTGA 85257 Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 || ||| | | | | ||||| || || || ||||| ||||||||||||| || || Sbjct 85258 TAGGCCGACGCTGTCCAGGAATTCTCGTGATCCGTTACCGTCCCAGATCTTAACCCC 85314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590063825686360