Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq926 105 1e-17
seq1525 104 5e-17
>seq926
Length=100607
Score = 105 bits (116), Expect = 1e-17
Identities = 260/397 (65%), Gaps = 18/397 (5%)
Strand=Plus/Plus
Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060
||||||||| || | ||| | ||||| || ||||| |||||||| || || ||||| ||
Sbjct 57247 CTTCCTCATATGTTGTTCTATGGTCCGCCAGGAACCGGCAAGACATCGACAATCCTCGCC 57306
Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120
|| || | || | || | || ||| || || ||||||||| |||| |||
Sbjct 57307 CTCGCGAAAGAGCTATACGGACCCGAGATGGTGAAAGCACGGGTGCTCGAGTTGAATGCT 57366
Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCG 254180
|| ||||| ||||| | | | || || || ||| | ||| |||| | |||
Sbjct 57367 TCCGACGAGCGCGGCATCAGCATTGTGCGGGAGAAGGTGAAGGATTTCGCGCGAATGCAA 57426
Query 254181 ATTTC-------------GTCGTTCCAACCCGGC-----TGTCCGCCTTTCAAGCTCGTG 254222
|| | | | || | ||| || ||||| |||||| || |
Sbjct 57427 CTTACAAACCCACCTCCGGGCTATCGAGACCGCTACCCTTGCCCGCCCTTCAAGATCATC 57486
Query 254223 ATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATG 254282
||||||||||| || || | |||||| ||||||||| ||| ||||| |||||||||
Sbjct 57487 ATCCTGGACGAAGCCGATAGCATGACACAAGACGCGCAGAGCGCGCTCCGTCGAACGATG 57546
Query 254283 GAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATC 254342
||||| | | | || ||||| ||||| | ||||||||||| | ||||||
Sbjct 57547 GAGACATATAGCAAGATCACCCGTTTCTGCCTCATCTGCAACTACGTCACCCGCATCATC 57606
Query 254343 GCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
| |||||| ||| ||| || |||||| || ||||
Sbjct 57607 GACCCGCTCGCTAGTCGTTGTAGCAAGTTCCGCTTCA 57643
>seq1525
Length=72983
Score = 104 bits (114), Expect = 5e-17
Identities = 115/152 (76%), Gaps = 1/152 (1%)
Strand=Plus/Plus
Query 254017 TCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGT 254076
|| |||| || ||||| || || |||||||||||| ||||||| || ||||| | | |
Sbjct 37988 TCTACGGCCCCCCCGGCACCGGGAAGACGTCAACCGTCCTGGCCCTCGCCCGGCGCATAT 38047
Query 254077 TGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGT 254136
||| ||| |||||| || || ||||||||||| ||||| || ||||| ||| |
Sbjct 38048 ACGGCCAGGACAACATGCGACAGATGGTGCTCGAGCTCAACGCCTCCGACGACCGC-GCA 38106
Query 254137 TGGACGTCGTCCGCGACAAGATCAAGACTTTC 254168
| ||||| || ||||| |||||||||| |||
Sbjct 38107 TCGACGTTGTGCGCGAGCAGATCAAGACGTTC 38138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073742200325312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |