Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq518 107 2e-18 >seq518 Length=5935 Score = 107 bits (118), Expect = 2e-18 Identities = 176/251 (70%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 5504 CCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTCC 5563 |||||| ||||| ||||| ||||| | | | ||||||| || ||||| || Sbjct 593 CCCGTGCTGCCGAAGCCGCCGGCGCCGCGCACGCTCGCGTCCAGCTCGGCGACCTCGACC 534 Query 5564 ACATCGGGGAACGCAGC-GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTAC 5622 || ||||| | || |||||| || ||||||||| || ||||||||| | Sbjct 533 ACGTCGGGCGT-GTAGATGCGCTCAATGACCAGCTGCGCGATGCGGTCGCCCTCGGCGAT 475 Query 5623 CTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGC 5682 || | ||| || |||| |||||| |||| | ||| | |||||||||||||| Sbjct 474 GGCGTAGTCGGCGTCGCCGTGGTTGAAGAGCAGGATCTTCACCTGCCCGCGGTAGTCGGC 415 Query 5683 GTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGC 5742 ||| || |||||||||||| | ||| |||||||| || |||||||||||||| || Sbjct 414 GTCGATGACGCCCGCGCCCGTCTGGATCGAGTGCTTGGAGGCGAGGCCGGAGCGGGGCGC 355 Query 5743 CACGCGGCCGT 5753 | |||||||| Sbjct 354 GATGCGGCCGT 344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430045180574408