Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq518 107 2e-18
>seq518
Length=5935
Score = 107 bits (118), Expect = 2e-18
Identities = 176/251 (70%), Gaps = 2/251 (1%)
Strand=Plus/Minus
Query 5504 CCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTCC 5563
|||||| ||||| ||||| ||||| | | | ||||||| || ||||| ||
Sbjct 593 CCCGTGCTGCCGAAGCCGCCGGCGCCGCGCACGCTCGCGTCCAGCTCGGCGACCTCGACC 534
Query 5564 ACATCGGGGAACGCAGC-GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTAC 5622
|| ||||| | || |||||| || ||||||||| || ||||||||| |
Sbjct 533 ACGTCGGGCGT-GTAGATGCGCTCAATGACCAGCTGCGCGATGCGGTCGCCCTCGGCGAT 475
Query 5623 CTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGC 5682
|| | ||| || |||| |||||| |||| | ||| | ||||||||||||||
Sbjct 474 GGCGTAGTCGGCGTCGCCGTGGTTGAAGAGCAGGATCTTCACCTGCCCGCGGTAGTCGGC 415
Query 5683 GTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGC 5742
||| || |||||||||||| | ||| |||||||| || |||||||||||||| ||
Sbjct 414 GTCGATGACGCCCGCGCCCGTCTGGATCGAGTGCTTGGAGGCGAGGCCGGAGCGGGGCGC 355
Query 5743 CACGCGGCCGT 5753
| ||||||||
Sbjct 354 GATGCGGCCGT 344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430045180574408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |