Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq1413 91.5 1e-13
seq1001 82.4 6e-11
>seq1413
Length=23416
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
|| || ||||||||||| || |||||||| |||| ||| || | || ||||| |||
Sbjct 19807 TGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCCAGTTGC 19866
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| || || |||| || || ||||| || || | | ||||||||| ||| ||
Sbjct 19867 TTTCCAGCGAAAATCAATCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGAATCTTG 19926
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||||| | | || || || | ||||||| ||| | || ||||| || || |||
Sbjct 19927 GACTTGACATTGTCGATAGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCCAGTG 19986
Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726
||||| || || || ||||||||
Sbjct 19987 AGAGTCTTAACGAAGATCTGCAT 20009
>seq1001
Length=42108
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
|| || ||||||||||| || |||||||| || | | || ||||||| ||||||
Sbjct 35586 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCGAGCTGC 35527
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| ||| || | || | ||| ||||| || || | | ||||||||| || ||
Sbjct 35526 TTGCCGGCGAAGATCAGACGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTG 35467
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||||| | | ||||| ||| | |||||| ||||| || || || || || |||
Sbjct 35466 GACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTG 35407
Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726
|| || || || || ||||||||
Sbjct 35406 AGGGTCTTGACGAAGATCTGCAT 35384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421242169295759
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |