Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1413 109 5e-19
>seq1413
Length=23416
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||| || ||||| |||| ||| | ||| ||||| || | ||| || || |
Sbjct 19783 CCACCTCGCAGACGCAATACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 19842
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| ||||| || ||||| | || || |||| |||||| ||||||||
Sbjct 19843 AAGGTGCGGCCATCTTCCAGTTGCTTTCCAGCGAAAATCAATCGTTGCTGGTCTGGAGGG 19902
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| || || ||||| | ||| || | |||||| | ||| |||||| | || ||
Sbjct 19903 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCCGAAGACTCCACC 19962
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|| | |||||||| || ||||| ||||| || || ||||||||||||
Sbjct 19963 TCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCATG 20010
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || | ||| || | ||||||||| | ||||| ||||| || | ||| || |||||
Sbjct 19272 CCACCACGCAAACGAAGCACCAAGTGTAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTT 19331
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||||||||||| || || | ||||| | || || ||||| |||||
Sbjct 19332 AGAGTTCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGTCGCTGTTGATCGGGAGGG 19391
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | || || ||| ||| | ||| ||||| | |||||
Sbjct 19392 ATACCTTCCTTGTCTTGGATCTTGCTCTTTACGTTGTCGATGGTGTCTGAAGATTCGACT 19451
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| | || || || ||||| || || || || || ||||| |||||||
Sbjct 19452 TCTAGAGTAATCGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCATGC 19500
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855
||| | ||| | |||||| ||||| || | || |||||||||| ||| | || |||
Sbjct 19061 CACTAGGTGGAGAGTAGACTCCTTCTGGATATTGTAATCGCTCAGAGT--TCGACCATCT 19118
Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915
|||||||| || || | ||||| | | ||||| ||||||||||||||||| |||||
Sbjct 19119 TCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCC 19178
Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975
| ||| || ||| ||| | | | || || | || || || | ||||||||
Sbjct 19179 TGAATCTTGCTCTTCACGTTGTCAATGGTATCTGACGATTCCACTTCCAAGGTGATGGTC 19238
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || | || || || |||||||||||
Sbjct 19239 TTTCCTGTCAATGTCTTGACGAAGATCTGCAT 19270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448281343197240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |