Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1336 428 1e-114
>seq1336
Length=25880
Score = 428 bits (474), Expect = 1e-114
Identities = 1091/1635 (67%), Gaps = 44/1635 (3%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| || || | || ||| ||| |||||||||||| | | || |||||||||||
Sbjct 5854 TTCACCCATGCTTCCCCTACACTGTTCAATGCTGGAACCCCGCAGCCTCAGATGTCTTCC 5795
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| | | | ||||| || ||| || ||||| || | |||||| ||||| |
Sbjct 5794 TGCTTCTTGGTCGACATGAAAGATGATAGTATTGAGGGCATTTATGACACCCTTAAAACA 5735
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTG 363724
|||||| | |||||||||| || ||||||||||| || || | || | | ||||
Sbjct 5734 TGTGCTATGATTTCCAAGATGGCTGGCGGAATTGGCCTGAATGTA--CATCGTATCCGTG 5677
Query 363725 CACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784
| | | ||||||| ||| || || |||||||| | || |||||| | |
Sbjct 5676 CCACGGGCTCTTACATTGCCGGTACCAATGGCACGTCGAATGGCATCGTCCCCATGTTAC 5617
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
| || || |||| || || | |||||||| || ||||| || || || || |
Sbjct 5616 GCGTCTTCAACAACACCGCCCGCTACGTCGATCAAGGTGGTAATAAACGACCGGGCGCTT 5557
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
||||||| || ||||| || || | ||| | |||||||| || || || || || |
Sbjct 5556 TTGCTATTTACCTCGAACCGTGGCACTCGGATGTATTTGAGTTCCTGGATCTGCGAAAGA 5497
Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964
|| || ||||||||| | ||||| ||||| || ||| || |||||| || |||| |
Sbjct 5496 ACCACGGTAAAGAGGAAGTTCGTGCTCGTGACCTCTTCCTAGCCCTTTGGATTCCTGATC 5437
Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATG 364022
|| ||||| || || ||| | | | | | ||| |||| | ||||| |||| ||
Sbjct 5436 TGTTCATGAAACGAGTTGAG--AAGAACGGCAGCTGGACACTGATGTGCCCGAACGAGTG 5379
Query 364023 TCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATC 364082
| | |||||| ||||||| | ||||| || | || || || ||||| ||||||||| |
Sbjct 5378 TGCTGGTCTTGCCGATGTCTACGGTGATGAGTTTGAAGCCCTCTACGAGAAGTATGAAGC 5319
Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142
||||| | || |||| || || |||||||| |||| |||||| | || |
Sbjct 5318 TGAGGGTCGCGGCCGCCAGACGATAAAAGCCCAGAAGCTCTGGTATGCCATTCTAGAGGC 5259
Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202
|||| ||||| |||| |||| ||| | ||||| || ||| |||||| |||
Sbjct 5258 TCAGACAGAGACTGGAAACCCCTTCATGCTCTACAAGGACCACGCCAATCGCAAGAGCAA 5199
Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACA 364261
|||| || |||| |||||||||| | || | || || || || ||||| ||||| ||||
Sbjct 5198 CCAGAAGAACCTGGGTACAATTC-GTAGTTCTAATCTCTGCACTGAGATCATTGAGTACA 5140
Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA 364321
||||| || || ||| || || ||| | || || || || | ||| | || ||
Sbjct 5139 GTGCTCCAGATGAAGTTGCTGTTTGCAACTTGGCATCCATGGCTTTACCGTCCTTCGTGG 5080
Query 364322 AAGAT------GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTT 364375
| || | | | ||| || | || | || |||||| | || |
Sbjct 5079 ACTATAACTCGGAAAGCTATGATTTTCAAAAGCTGCACGAGGTAACCCAAGTTGTTGTGC 5020
Query 364376 GCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCG 364430
||||||| ||| || |||||| || | ||||| | ||||| || || |||
Sbjct 5019 GCAATCTGAACAGAGTCATCGACGCAAACCACTATCCTGTCCCTGAGGCACGTAACAGC- 4961
Query 364431 TTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA--CGTTTTT 364488
|| ||||| || ||||| |||||||| ||||| ||||| || || || | || |
Sbjct 4960 ----AACATGCGCCACCGCCCTATTGGTCTCGGTGTCCAGGGTCTAGCCGATACCTTCCT 4905
Query 364489 ATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTT 364548
|| | ||| ||| | ||||| ||||| || ||||| || || ||| |||| |||
Sbjct 4904 -TGCT-CTCCGCATGCCTTTTGAATCGCCCGAAGCTCGACAGCTCAACAAGCAGATTTTT 4847
Query 364549 GAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAG 364608
|| || ||||| |||||| ||||||| || || | || || | || |
Sbjct 4846 GAGACCATGTACCATGCCGCTTTGACTGCATCAATGGAGATTGCTAAGGAAGAAGGTACT 4787
Query 364609 TACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAAT 364668
||||||||||| ||||| || ||| |||| || || | | |||| ||| | ||||||
Sbjct 4786 TACTCTACTTACGAGGGCTCTCCTGTTTCTCAAGGCATTCTTCAGTATGACATGTGGAAT 4727
Query 364669 GTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGG 364727
||||| || |||| | ||| |||||| ||| || | | || || || |||||
Sbjct 4726 GTCACTCCCTCTGATCTTTGGGACTGGGCTACCCTCAAGGAGCAGATCAAACAA-CATGG 4668
Query 364728 TACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGG 364787
| |||||| ||| | | || |||||||| || || ||| | ||||| || ||
Sbjct 4667 TGTACGCAACAGTCTCCTCATGGCTCCCATGCCGACCGCCAGTACCTCGCAGATTCTGGG 4608
Query 364788 AAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGG 364847
|| ||||| |||||||| || | || || |||| || || || ||| | ||||
Sbjct 4607 CAATAACGAATGCTTCGAGCCCTACACGTCGAACATTTACTCTCGTCGTGTTTTAGCCGG 4548
Query 364848 AGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGG 364907
||||| | || || ||| | || | |||||||| ||| | || || |||
Sbjct 4547 TGAATTCCAAGTCGTCAATCCATGGCTTCTGAAGGATCTGGTCGATCTAGGTCTATGGTC 4488
Query 364908 TGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCC-AGGAT 364966
||| | ||||||||| |||||||||| ||| || || |||| ||||| || ||
Sbjct 4487 TGATAATATGAAGAACCGCATCATCGCCGAGGGTGGCTCCGTTCAGAGTATTCCTAGCAT 4428
Query 364967 TTC--CAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCT 365024
| | | |||| || |||||| | ||||| || || ||||||||||| |||||| |
Sbjct 4427 TCCGGCGGAAG-TCA-AAGCCT-TATACAAGACTGTCTGGGAAATTTCTCAGCGAACAGT 4371
Query 365025 CATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATT 365084
| | ||||| |||||||| |||||||| || |||| || || | || ||||
Sbjct 4370 AGTGCAAATGGCTGCCGATCGTGGTGCTTTCATTGATCAGTCACAATCACTCAA--TATT 4313
Query 365085 C--ATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTAC-GGGTGGAAATC 365141
| |||| |||| || | |||| | || |||||| || ||| ||||||||
Sbjct 4312 CATATGAGGGAGCCCACAATGGGCAAGATCACGAGCATGCACTT-TACTGGGTGGAAGCT 4254
Query 365142 CGGTCTTAAGACAGG 365156
||||| ||||| ||
Sbjct 4253 TGGTCTGAAGACTGG 4239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303324226075538
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |