Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1413 89.7 4e-13 seq1368 87.8 1e-12 >seq1413 Length=23416 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | || ||||| || || ||| |||||| || ||||||||||| | | Sbjct 19783 CCACCTCGCAGACGCAATACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 19842 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || |||| ||| || || || |||| | || || ||||| ||| Sbjct 19843 AAGGTGCGGCCATCTTCCAGTTGCTTTCCAGCGAAAATCAATCGTTGCTGGTCTGGAGGG 19902 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| ||| | ||| || | | | | |||||| | |||| Sbjct 19903 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCCGAAGACTCCACC 19962 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| || || || || || || || || |||||||| Sbjct 19963 TCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 20009 >seq1368 Length=24850 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 16746 CCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAA 16805 |||| || ||||||||||||| | |||| | ||||||| | || ||||| || | | Sbjct 8267 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 8208 Query 16806 TAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-CGGCAATTTGCTGCTTCACCTGG 16864 |||| ||||| || ||| || | ||||| |||| | | | ||||| |||||| | | Sbjct 8207 TAAGACGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGCT-CTTCACATTG 8149 Query 16865 CCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACA 16924 | | |||||| || ||| || | ||||||||| || || || || || ||||| Sbjct 8148 TCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 8089 Query 16925 AAAATCTGCA 16934 || ||||||| Sbjct 8088 AAGATCTGCA 8079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405079315799410