Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq1413 89.7 4e-13
seq1368 87.8 1e-12
>seq1413
Length=23416
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | || ||||| || || ||| |||||| || ||||||||||| | |
Sbjct 19783 CCACCTCGCAGACGCAATACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 19842
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | || |||| ||| || || || |||| | || || ||||| |||
Sbjct 19843 AAGGTGCGGCCATCTTCCAGTTGCTTTCCAGCGAAAATCAATCGTTGCTGGTCTGGAGGG 19902
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| |||||| ||||| ||| | ||| || | | | | |||||| | ||||
Sbjct 19903 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCCGAAGACTCCACC 19962
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||||| || || || || || || || || ||||||||
Sbjct 19963 TCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 20009
>seq1368
Length=24850
Score = 87.8 bits (96), Expect = 1e-12
Identities = 135/190 (71%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 16746 CCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAA 16805
|||| || ||||||||||||| | |||| | ||||||| | || ||||| || | |
Sbjct 8267 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 8208
Query 16806 TAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-CGGCAATTTGCTGCTTCACCTGG 16864
|||| ||||| || ||| || | ||||| |||| | | | ||||| |||||| | |
Sbjct 8207 TAAGACGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGCT-CTTCACATTG 8149
Query 16865 CCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACA 16924
| | |||||| || ||| || | ||||||||| || || || || || |||||
Sbjct 8148 TCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 8089
Query 16925 AAAATCTGCA 16934
|| |||||||
Sbjct 8088 AAGATCTGCA 8079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405079315799410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |