Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1413 122 8e-23 >seq1413 Length=23416 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || ||||||| | |||||||| ||||| Sbjct 19270 ATGCAGATCTTCGTCAAGACATTGACAGGAAAGACCATCACCTTGGAAGTGGAATCGTCA 19211 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || || ||||| || || ||||| ||||| ||||| || ||||| Sbjct 19210 GATACCATTGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGTATTCCTCCAGACCAG 19151 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || || || || | ||||||| ||| ||| || ||||||||||| Sbjct 19150 CAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGAACTCTGAGCGATTACAAT 19091 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || ||||||| Sbjct 19090 ATCCAGAAGGAGTCTACTCTCCACCTAGTGCT 19059 Score = 86.0 bits (94), Expect = 5e-12 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | || || || ||||||| | || |||||||| || Sbjct 20009 ATGCAGATCTTCGTTAAGACTCTCACTGGCAAGACCATCACCTTGGAGGTGGAGTCTTCG 19950 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || || ||| | || | ||| ||||| || || || || || ||| Sbjct 19949 GACACTATCGA--CAATGTCAAGTCCAAGATTCA-GGACAAGGAGGGCATCCCTCCAGAC 19893 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | ||||| || || || ||| | ||||||| ||||| || || ||| Sbjct 19892 CAGCAACGATTGATTTTCGCTGGAAAGCAACTGGAAGATGGCCGCACCTTGTCTGACTAC 19833 Query 25176 AATATTCAAAAAGA 25189 || || || || || Sbjct 19832 AACATCCAGAAGGA 19819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433318710395585