Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1008 91.5 2e-13
>seq1008
Length=41606
Score = 91.5 bits (100), Expect = 2e-13
Identities = 154/220 (70%), Gaps = 6/220 (3%)
Strand=Plus/Minus
Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143
||| || || ||||||||||| || | ||||||||| || || || | ||| || ||
Sbjct 2126 ACAATAGACAGGCAAAGTCGGTGTGGAGACCTTCGTCACGCGAGATGAGCTCGTTAGAGA 2067
Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203
| || | || || | ||| || || ||||||||||| || || || || ||| |||
Sbjct 2066 AGGTCAGGCCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGCACCGC 2007
Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT 93263
|| || |||||||| ||||| || || || | | ||||| ||||||| | ||||
Sbjct 2006 TGAAGAAGATACCTTCAACGGCAGCGAAAGCAATCAGACGTTGGGCAAAA---GTCGAAT 1950
Query 93264 TAC-TGCTG--ATCCATTTTAAAGCCCAATCGGCtttttt 93300
| | | | ||||| |||| |||||| || || || ||
Sbjct 1949 TGCGATCAGCAATCCACTTTAGAGCCCAGTCAGCCTTCTT 1910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556848556023160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |