Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1008 91.5 2e-13 >seq1008 Length=41606 Score = 91.5 bits (100), Expect = 2e-13 Identities = 154/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143 ||| || || ||||||||||| || | ||||||||| || || || | ||| || || Sbjct 2126 ACAATAGACAGGCAAAGTCGGTGTGGAGACCTTCGTCACGCGAGATGAGCTCGTTAGAGA 2067 Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203 | || | || || | ||| || || ||||||||||| || || || || ||| ||| Sbjct 2066 AGGTCAGGCCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGCACCGC 2007 Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT 93263 || || |||||||| ||||| || || || | | ||||| ||||||| | |||| Sbjct 2006 TGAAGAAGATACCTTCAACGGCAGCGAAAGCAATCAGACGTTGGGCAAAA---GTCGAAT 1950 Query 93264 TAC-TGCTG--ATCCATTTTAAAGCCCAATCGGCtttttt 93300 | | | | ||||| |||| |||||| || || || || Sbjct 1949 TGCGATCAGCAATCCACTTTAGAGCCCAGTCAGCCTTCTT 1910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556848556023160