Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1008 167 4e-36 >seq1008 Length=41606 Score = 167 bits (184), Expect = 4e-36 Identities = 347/507 (68%), Gaps = 15/507 (3%) Strand=Plus/Plus Query 42645 AAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGG 42704 |||||||| |||||||| || || ||||| | || | | | || || | | | | Sbjct 1910 AAGAAGGCTGACTGGGCTCTAAAGTGGATTGCTGATCGCAATTCGACTTTTGCCCAACGT 1969 Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 ||| | || || | ||||| || || ||||||||| || || |||||||| |||||| Sbjct 1970 CTGATTGCTTTCGCTGCCGTTGAAGGTATCTTCTTCAGCGGTGCTTTCGCCTCTATCTTC 2029 Query 42765 TGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAG 42823 ||||||||| || ||| | ||||||||| || |||||||| ||||| |||||| | Sbjct 2030 TGGCTCAAGAAGCGTGGTCT-GATGCCCGGCCTGACCTTCTCTAACGAGCTCATCTCGCG 2088 Query 42824 GGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA 42883 ||||| || || || | ||||||||||| || |||| || |||| | | | || Sbjct 2089 TGACGAAGGTCTCCACACCGACTTTGCCTGTCTATTGTTTTC---CCACTTGAAGAACCG 2145 Query 42884 GCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTT 42943 |||| || || || || | ||| || |||||| ||||||| | || || Sbjct 2146 GCCCAGCAAAGAAGTCGTAGAAGCAGTTATCGTCGATGCCGTGAGGATCGAGCAAGAATT 2205 Query 42944 CCTCACGCAGTCGCTGCC---CGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAA 43000 ||| || || | || || || || ||| |||| ||||| |||||||| | Sbjct 2206 CCTGACAGAGGCTCTACCTTGCG-GT--CTGCTCGGTATGAATGCAAACCTCATGAAGCA 2262 Query 43001 GTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTC--TCAGCCGCCTCTAC 43058 |||||| ||| ||| ||||| | ||| || || | | || | | || | ||||| Sbjct 2263 GTACATTGAGTTCGTGGCCGATCGTCTGCT-TGTCGCTTTGGGCAATGAGAAG-GTCTAC 2320 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 | | | ||| ||||| || ||||||||||| ||| | | |||||||| ||||| Sbjct 2321 CGCTCTACCAACCCGTTCGATTTCATGGAGAACATTTCGCTCGGTGGCAAGACAAACTTC 2380 Query 43119 TTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||| |||||||||| || |||||| Sbjct 2381 TTCGAAAAGCGCGTCGGTGATTACCAG 2407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944318436341840