Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1413 89.7 4e-13 seq1052 82.4 6e-11 >seq1413 Length=23416 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || |||||||| || || || |||||||||||||| |||||||| || | | ||| Sbjct 19509 AGGCGCAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCACTGAGTGTTCGG 19568 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| || | ||||| |||||||| |||| ||||||||| || || | || |||| Sbjct 19569 CCGTCCTCGAGCTGCTTTCCGGCAAAAATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCT 19628 Query 34030 TTGTCCATAATTTT 34043 |||||| ||| || Sbjct 19629 TTGTCCTGAATCTT 19642 >seq1052 Length=38482 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/92 (82%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCACG-TTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| ||||||||||||||||| |||||||||||| |||| ||| || ||| Sbjct 29430 CATGTATTAGCTCTAGAATTACCACGGTTATCCAAGTAATAAAGTACTATCAAATAAACA 29371 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCG 115620 | ||||||| || ||||||||||| || ||| Sbjct 29370 ATAACTGATTTAATGAGCCATTCGCAGTTTCG 29339 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/92 (82%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCACG-TTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| ||||||||||||||||| |||||||||||| |||| ||| || ||| Sbjct 29430 CATGTATTAGCTCTAGAATTACCACGGTTATCCAAGTAATAAAGTACTATCAAATAAACA 29371 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCG 114423 | ||||||| || ||||||||||| || ||| Sbjct 29370 ATAACTGATTTAATGAGCCATTCGCAGTTTCG 29339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397053887850718