Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1604 102 2e-16
seq1008 95.1 3e-14
>seq1604
Length=18022
Score = 102 bits (112), Expect = 2e-16
Identities = 176/253 (70%), Gaps = 6/253 (2%)
Strand=Plus/Minus
Query 334105 AGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTT 334164
|||| || | | ||| | || ||| | | ||| || |||||||| ||| | ||||||
Sbjct 6338 AGTCGATCGTTGTCATTTCAGTATCAGCCGAGTCAAGGTCGTGTTCGACGAAGACAGTTT 6279
Query 334165 TCAAAACATC-CGCAGA--GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCA 334221
| ||| || | | | |||||| || || | ||| |||| || ||||||||||
Sbjct 6278 T---AACCTCGCTCTGCTTGGGGAAGCCCTCGACCTGTTCGTTGTTGATGGCGCGCATCA 6222
Query 334222 GAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGAT 334281
||||||| || |||| ||||| || || || ||||||||||| |||||||| ||
Sbjct 6221 GAGTTGACTTGCCCGAACCGTTGGGACCGCAAAGACCGTAGCGACGACCACGCTTTAGTC 6162
Query 334282 TGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCAC 334341
| | || | ||| || || ||||| |||| || || ||||| ||| |||| |
Sbjct 6161 GTAGGTGTGTCTGGTTGAGCAGGATTTTGGCACCGTAGGCGAGAGAGAATGTGCAATTGC 6102
Query 334342 ACAGATCCTCACC 334354
| |||||||||||
Sbjct 6101 AGAGATCCTCACC 6089
>seq1008
Length=41606
Score = 95.1 bits (104), Expect = 3e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 243544 GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAA 243603
|| ||| | || ||| | || | || ||||| | | |||||| |||||||| ||
Sbjct 2213 GAGGCTCTACCTTGCGGTCTGCTCGGTATGAATGCAAACCTCATGAAGCAGTACATTGAG 2272
Query 243604 TTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAAC 243663
||||| ||||| || | | |||| | || ||||||| || ||| ||| | |||
Sbjct 2273 TTCGTGGCCGATCGTCTGCTTGTCGCTTTGGGCAATGAGAAGGTCTACCGCTCTACCAAC 2332
Query 243664 CCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGT 243723
|| || | || |||||| ||||||||| || || || |||||||||||||||||
Sbjct 2333 CCGTTCGATTTCATGGAGAACATTTCGCTCGGTGGCAAGACAAACTTCTTCGAAAAGCGC 2392
Query 243724 GTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753
||| ||||||| || | | || ||||| |||
Sbjct 2393 GTCGGTGATTACCAGAAGGCC-GGTGTTATG 2422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102855144186650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |