Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq883 111 2e-19 >seq883 Length=50859 Score = 111 bits (122), Expect = 2e-19 Identities = 282/420 (67%), Gaps = 13/420 (3%) Strand=Plus/Plus Query 10779 TGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGT 10838 |||| | |||||||| || || || || | | || | |||||| | ||| | | || Sbjct 49042 TGATATGTCGATCAAAACGGCCAGGTCGCATCAAAGCCTGGTCAAGCACATCTACTCTGT 49101 Query 10839 TCGTCGCCGCGATGACAACGA--TGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAA 10896 | || | || | |||||||| ||| ||| |||| | ||| || |||||||| || | Sbjct 49102 TGGTACCAGCAAGGACAACGACCTGCTCGT-TCGTATTGAAA-CCGTCCATCTCTGTAAG 49159 Query 10897 GAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCACCCGCACTGCGTT- 10955 || ||||||| ||| || |||||||| || || || ||| | || | | Sbjct 49160 GATCTGATTGAGGGTAGCCTCCCGTTCATCGTTACCGC-CAAACCTCTGGCCTTCAGAAC 49218 Query 10956 --GCT-TACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGG 11012 ||| |||||| |||||| ||||||||||| || | ||| || || || | ||| | Sbjct 49219 GAGCTCTACCGATGGCGTCGATTTCATCGATAAAGATGATGCATGGCGCGTTCTTACGCG 49278 Query 11013 CAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAAT 11072 || ||| | || || |||||| |||||| || || || ||||| |||||||| | Sbjct 49279 CAGTAGAAAAAAGGTCGCGCACTCTCGAGGCACCTACGCCGACGAACATCTCCACAAATT 49338 Query 11073 TGG--CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAG 11130 | | || || | | ||||| ||| || || || || ||||| || || Sbjct 49339 CAGAACCGCTGACGGT--AAAAAAGGGCACGCCAGACTCGCCAGCAGTGGCTTTTGCCAG 49396 Query 11131 GAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 11190 || ||||| || || |||||| ||||| |||| || ||||| |||||| ||||||| Sbjct 49397 CAGCGTCTTACCAGTACCAGGTGGACCTGCAAGAATAGCGCCACGAGGGATCTTGGCACC 49456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597340465687720