Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq1336 194 2e-44
>seq1336
Length=25880
Score = 194 bits (214), Expect = 2e-44
Identities = 607/929 (65%), Gaps = 12/929 (1%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| ||||||||| ||||| || || ||||| ||||
Sbjct 6022 AACTACCAATACTTCGGCTTCAAGACTCTGGAGCGATCGTATCTTCTGAAGATCAATGGA 5963
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || |||| |||| || || || | ||||| || || | || ||| || ||
Sbjct 5962 AAGATTGTCGAGAGACCTCAGCACATGATCATGCGTGTGGCGGTAGGTATTTGGGGAGAC 5903
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|| | ||| || | | | | || |||| ||| | ||| ||
Sbjct 5902 GATGTTGAGAAAGTCCTCGAGACCTACAACCTCATGTCCCTCAAATACTTCACCCATGCT 5843
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
|||| || |||||||| || || |||||| ||| ||||||||||| || ||| || |
Sbjct 5842 TCCCCTACACTGTTCAATGCTGGAACCCCGCAGCCTCAGATGTCTTCCTGCTTCTTGGTC 5783
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | || | || || || |||| |||| ||| || ||||| | ||
Sbjct 5782 GAC-ATGAAAGATGATAGTATTGAGGGCATTTATGACACCCTTAAAACATGTGCTATGAT 5724
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCC 94071
|| || || || ||||| || | | ||| || |||| ||||||| ||| ||
Sbjct 5723 TTCCAAGATGGCTGGCGGAATTGGCCTGAATGTACAT--CGTATCCGTGCCACGGGCTCT 5666
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
||||| ||||||||||||||| || || ||| ||||||| ||| | || |||||||||
Sbjct 5665 TACATTGCCGGTACCAATGGCACGTCGAATGGCATCGTCCCCATGTTACGCGTCTTCAAC 5606
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || |||||||| || || |||||| | | ||| |||| || | ||
Sbjct 5605 AACACCGCCCGCTACGTCGATCAAGGTGGTAATAAACGACCGGGCGCTTTTGCTATTTAC 5546
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
||||| || |||||| |||| || | ||| | || ||||||||||||||||| ||
Sbjct 5545 CTCGAACCGTGGCACTCGGATGTATTTGAGTTCCTGGATCTGCGAAAGAACCACGGTAAA 5486
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| | | || | ||||||||| || || ||| | || || || || ||||||
Sbjct 5485 GAGGAAGTTCGTGCTCGTGACCTCTTCCTAGCCCTTTGGATTCCTGATCTGTTCATGAAA 5426
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|| || ||||| ||| | ||||| || | || || || || ||| | || || ||
Sbjct 5425 CGAGTTGAGAAGAACGGCAGCTGGACACTGATGTGCCCGAACGAGTGTGCTGGTCTTGCC 5366
Query 94372 GACGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAG 94428
|| || | | ||| | | ||||||| | | || | || ||| | |||| | |
Sbjct 5365 GATGTCTACGGTGAT-GAG-TTTGAAGCCCTCTACGAGAAGTATGAAGCTGAGGGTCGCG 5308
Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488
||| | || || | || |||||| ||| || || | || | ||| |||
Sbjct 5307 GCC-GCCAGACGATAAAAGCCCAGAAGCTCTGGTATGCCATTCTAGAGGCTCAGACAGAG 5249
Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548
|| || | |||| ||| | | ||||||| | ||| |||| ||||||| || ||
Sbjct 5248 ACTGGAAACCCCTTCATGCTCTACAAGGACCACGCCAATCGCAAGAGCAACCAGAAGAAC 5189
Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608
|| || || || || ||||| ||||| ||||| | ||||| | | |||| ||
Sbjct 5188 CTGGGTACAATTCGTAGTTCTAATCTCTGCACTGAGATCATTGAGTACAGTGCTCCAGAT 5129
Query 94609 GAGATTGCTGTGTGTAACCTGGGCTCCAT 94637
|| ||||||| || ||| ||| |||||
Sbjct 5128 GAAGTTGCTGTTTGCAACTTGGCATCCAT 5100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494712322273640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |