Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1413 104 2e-17 >seq1413 Length=23416 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 |||| || || ||||| || || || || ||||||||||| ||| ||| | ||||| Sbjct 19062 ACTAGGTGGAGAGTAGACTCCTTCTGGATATTGTAATCGCTCAGAGTTCGACCATCTTCC 19121 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || |||||| | || | ||||| ||||| ||||| ||||||||||| | Sbjct 19122 AGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGA 19181 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||||| || || | || || ||||| ||| || || ||||| ||||| || Sbjct 19182 ATCTTGCTCTTCACGTTGTCAATGGTATCTGACGATTCCACTTCCAAGGTGATGGTCTTT 19241 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||||| || || || || || |||||| Sbjct 19242 CCTGTCAATGTCTTGACGAAGATCTGCATA 19271 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| ||||| | | || || || || ||||| || || || |||||||| ||||| Sbjct 19272 CCACCACGCAAACGAAGCACCAAGTGTAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTT 19331 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| ||| |||| || | || || |||||| | || | |||||||| ||| || Sbjct 19332 AGAGTTCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGTCGCTGTTGATCGGGAGGG 19391 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| || ||||| ||||| | || || || || | ||| || Sbjct 19392 ATACCTTCCTTGTCTTGGATCTTGCTCTTTACGTTGTCGATGGTGTCTGAAGATTCGACT 19451 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| ||||| || || || || || || || || || |||||||| Sbjct 19452 TCTAGAGTAATCGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 19498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357384338297315