Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1413 87.8 2e-12 >seq1413 Length=23416 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| |||| ||| ||||| ||| | ||||||||||||||||| || || ||||| || || Sbjct 19854 ATCTTCCAGTTGCTTTCCAGCGAAAATCAATCGTTGCTGGTCTGGAGGGATGCCCTCCTT 19913 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 || ||||| || |||| || | ||||| |||||||| || || | || | Sbjct 19914 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCCGAAGACTCCACCTCCAAGGTGAT 19973 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || ||||| || || || || ||||| Sbjct 19974 GGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 20009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451993261579640