Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1008 113 7e-20
seq1336 86.0 1e-11
>seq1008
Length=41606
Score = 113 bits (124), Expect = 7e-20
Identities = 160/224 (71%), Gaps = 1/224 (0%)
Strand=Plus/Minus
Query 159913 AAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGA 159972
||||| || || ||||||||| ||| || || ||||| || ||||||| |||||| ||
Sbjct 2128 AAACAATAGACAGGCAAAGTCGGTGTGGAGACCTTCGTCACGCGAGATGAGCTCGTTAGA 2069
Query 159973 CATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACC 160032
| | | ||||| ||||| | |||||| |||||||| || || | || ||||||||
Sbjct 2068 GAAGGTCAGGCCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGCACC 2009
Query 160033 GCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTT 160092
||| || ||||| || || ||||| || || || | || | | |||||| | ||
Sbjct 2008 GCTGAAGAAGATACCTTCAACGGCAGCGAAAGCAATCAGACGTTGGGCAAAAGTCGAATT 1949
Query 160093 GGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGA 160136
| ||| ||||| || ||||| ||||||||| ||||||
Sbjct 1948 GCGATCAGCAATCCACTTTAGAGCCCAGTCAGCCTTC-TTGCGA 1906
>seq1336
Length=25880
Score = 86.0 bits (94), Expect = 1e-11
Identities = 186/276 (67%), Gaps = 2/276 (1%)
Strand=Plus/Plus
Query 204239 GTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATG 204298
||| | || ||||| ||||| ||||| | |||||| | ||| ||||| || ||||||
Sbjct 4581 GTGTAGGGCTCGAAGCATTCGTTATTGCCCAGAATCTGCGAGGTACTGGCGGTCGGCATG 4640
Query 204299 GGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGC-GCTTCAGAGAGGT 204357
||||||| ||| || |||||| ||||| | || || || |||| ||| || | |
Sbjct 4641 GGAGCCATGAGGAGACTGTTGCGTACACCATGTTGTTTGA-TCTGCTCCTTGAGGGTAGC 4699
Query 204358 CCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACT 204417
|||||| | || ||| | || ||||||||| |||||| |||||||||
Sbjct 4700 CCAGTCCCAAAGATCAGAGGGAGTGACATTCCACATGTCATACTGAAGAATGCCTTGAGA 4759
Query 204418 GACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGC 204477
|| || ||||| ||| || | |||| || || | || | || || ||
Sbjct 4760 AACAGGAGAGCCCTCGTAAGTAGAGTAAGTACCTTCTTCCTTAGCAATCTCCATTGATGC 4819
Query 204478 GGCCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513
| || ||| || ||||||||||||||| |||||
Sbjct 4820 AGTCAAAGCGGCATGGTACATGGTCTCAAAAATCTG 4855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795137716525040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |