Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq1413 91.5 1e-13 >seq1413 Length=23416 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| ||||||| ||||| ||||| || | |||||| || || || || || || || | Sbjct 19782 GCCACCTCGCAGACGCAATACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGA 19841 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 ||| ||| |||| |||| ||| || || | ||||| || || ||||| || | || Sbjct 19842 CAAGGTGCGGCCATCTTCCAGTTGCTTTCCAGCGAAAATCAATCGTTGCTGGTCTGGAGG 19901 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTG--TTTA-ATCGTCGCTACTGTGTCTGCGCTTTC 39668 | ||| || ||||| | | | || | || | || |||| || ||||| | || Sbjct 19902 GATGCCCTCCTTGTC-CTGAATCTTGGACTTGACATTGTCGATA--GTGTCCGAAGACTC 19958 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 ||| ||||| || || || || || || | ||| || ||||||||||||||| Sbjct 19959 CACCTCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCATG 20010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347362153155647