Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq1336 255 7e-63
seq1008 109 7e-19
>seq1336
Length=25880
Score = 255 bits (282), Expect = 7e-63
Identities = 905/1392 (65%), Gaps = 29/1392 (2%)
Strand=Plus/Minus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| ||||||| || ||| | ||||| || || ||| |||| ||
Sbjct 5947 CCTCAGCACATGATCATGCGTGTGGCGGTAGGTATTTGGGGAGACGATGTTGAGAAAGTC 5888
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTT 111730
| ||||| ||| || ||||||| | || |||| ||| || | || || || ||
Sbjct 5887 CTCGAGACCTACAACCTCATGTCCC-TCAAATACTTCACCCATGCTTCCCCTACACTGTT 5829
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
||| ||||| || || || || ||||| || ||| | | | | || || ||
Sbjct 5828 CAATGCTGGAACCCCGCAGCCTCAGATGTCTTCCTGCTTCTTGGTCGACATGAAAGATGA 5769
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
| || | |||||||| | ||| || | |||||| || || ||| ||||||
Sbjct 5768 TAGTATTGAGGGCATTTATGACACCCTTAAAACATGTGCTATGATTTCCAAGATGGCTGG 5709
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910
|| || || || | | ||| | || | |||| ||| ||| ||||| ||
Sbjct 5708 CGGAATTGGCCTGAATGTACATCGTATCCGTGCCACGGGCTCTTACATTGCCGGTACCAA 5649
Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970
||| || |||| || | || ||| | ||||| || ||| ||| || ||||| ||
Sbjct 5648 TGGCACGTCGAATGGCATCGTCCCCATGTTACGCGTCTTCAACAACACCGCCCGCTACGT 5589
Query 111971 AAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 112027
| |||| ||| | || ||| || | || | || || || || |||||| |
Sbjct 5588 CGATCAAGGTGGTAATAAACGACCGGGCGCTTTTGCTATTTACCTCGAACCGTGGCACTC 5529
Query 112028 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-C 112086
|||| | | |||||||| || |||| ||||| ||| | ||||| | || ||| |
Sbjct 5528 GGATGTATTTGAGTTCCTGGATCTGCGAAAGAACCACGGTAAAGAGGAAGTTCG-TGCTC 5470
Query 112087 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 112146
| || |||||| || || |||||||| ||||| |||||||| |||||||| ||| |
Sbjct 5469 GTGACCTCTTCCTAGCCCTTTGGATTCCTGATCTGTTCATGAAACGAGTTGAGAAGAACG 5410
Query 112147 GCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGG 112206
||| ||| | || | || || || || | ||||| |||||| | ||||| |
Sbjct 5409 GCAGCTGGACACTGATGTGCCCGAACGAGTGTGCTGGTCTTGCCGATGTCTACGGTGATG 5350
Query 112207 AGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGTGCC 112264
||||||||||||||||| ||||| || | || ||| ||| | || |||| |
Sbjct 5349 AGTTTGAAGCCCTCTACGAGAAGTATGAAGCTGAGGGTC--GCGGCCGCCAGACGATAAA 5292
Query 112265 AGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATA 112323
||| | || | | ||| | || ||||| || |||| || |||||||| | || | |
Sbjct 5291 AGC-CCAGAAGCTCTGGTATGCCATTCTAGAGGCTCAGACAGAGACTGGAAACCCCTTCA 5233
Query 112324 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGA 112383
|||| ||||| ||| | || | ||||| || || ||||| ||||| || |
Sbjct 5232 TGCTCTACAAGGACCACGCCAATCGCAAGAGCAACCAGAAGAACCTGGGTACAATTCGTA 5173
Query 112384 GTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTA 112443
|||| || ||||| || || ||| | || | | | |||||| ||||| || |
Sbjct 5172 GTTCTAATCTCTGCACTGAGATCATTGAGTACAGTGCTCCAGATGAAGTTGCTGTTTGCA 5113
Query 112444 ACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--TTTGATTA 112501
|| | ||||| || ||| | || | ||||| | | | || || | | |||||
Sbjct 5112 ACTTGGCATCCATGGCTTTACCGTCCTTCGTGGA-CTATA-ACTCGGAAAGCTATGATTT 5055
Query 112502 TGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAG 112561
| |||| || ||||| || || || ||| || || |||||||| || ||
Sbjct 5054 TCAAAAGCTGCACGAGGTAACCCAAGTTGTTGTGCGCAATCTGAACAGAGTCATCGACGC 4995
Query 112562 AAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 112618
||| || || || |||| || ||||| || ||| | ||||| || |||||
Sbjct 4994 AAACCACTATCCTGTCCCTGAG---GCACGTAACAGCAACATGCGCCACCGCCCTATTGG 4938
Query 112619 TCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGA 112678
|||||||||||| ||||| || ||| ||| || | ||| | ||||| ||
Sbjct 4937 TCTCGGTGTCCAGGGTCTAGCCGATACCTTCCTTGCTCTCCGCATGCCTTTTGAATCGCC 4878
Query 112679 CGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA-GG 112737
|||||| | |||| || || |||||||| ||||| || |||||| |||| |
Sbjct 4877 CGAAGCTCGACAGCTCAACAAGCAGATTTTTGAGACCATGTACCATGCCGCT-TTGACTG 4819
Query 112738 CGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 112797
| |||| | || ||| || ||| | || || | ||||| ||||| | ||
Sbjct 4818 CATCAATGGAGATTGCTAAGGAAGAAGGTACTTACTCTACTTACGAGGGCTCTCCTGTTT 4759
Query 112798 CACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTG 112855
| ||||| | ||||| | ||| |||| |||| || | || || || | |||||
Sbjct 4758 CTCAAGGCATTCTTCAGTATGACATGT-GGAATGTCACTCC-CTCTGATCTTTGGGACTG 4701
Query 112856 GGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 112915
|| | |||||||| | ||||| | | ||| | || |||||||| | ||||| ||
Sbjct 4700 GGCTACCCTCAAGGAGCAGATCAAACAACATGGTGTACGCAACAGTCTCCTCATGGCTCC 4641
Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975
||||| || ||| ||| | || || |||| ||||| |||||||| || ||||||||
Sbjct 4640 CATGCCGACCGCCAGTACCTCGCAGATTCTGGGCAATAACGAATGCTTCGAGCCCTACAC 4581
Query 112976 GACGAACATCTA 112987
| ||||||| ||
Sbjct 4580 GTCGAACATTTA 4569
>seq1008
Length=41606
Score = 109 bits (120), Expect = 7e-19
Identities = 154/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 102120 ATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTG---ATACAAAGTCGCGTTCCTTT 102176
|||| ||||| || || |||||| | |||||| ||| || || ||| || ||
Sbjct 1904 ATTCGCAAGAAGGCTGACTGGGCTCTAAAGTGGATTGCTGATCGCAATTCGACTT---TT 1960
Query 102177 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 102236
|| | || || | || || || ||||| |||||||||||| ||| | ||| |
Sbjct 1961 GCCCAACGTCTGATTGCTTTCGCTGCCGTTGAAGGTATCTTCTTCAGCGGTGCTTTCGCC 2020
Query 102237 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 102296
|||| | |||||||||||||| ||||| ||||| || || |||||| ||||||||
Sbjct 2021 TCTATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGCCTGACCTTCTCTAACGAGCTC 2080
Query 102297 ATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||| |||||||| || |||||| || |||||
Sbjct 2081 ATCTCGCGTGACGAAGGTCTCCACACCGACTTTGC 2115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620728751426480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |