Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1336 194 2e-44
seq883 125 8e-24
>seq1336
Length=25880
Score = 194 bits (214), Expect = 2e-44
Identities = 1051/1663 (63%), Gaps = 33/1663 (2%)
Strand=Plus/Plus
Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566
|| || |||||||| ||||| ||||||||| || ||||| | | | || || |
Sbjct 4323 GATTGTGACTGATCAATGAAAGCACCACGATCGGCAGCCATTTGCACTA----CTGTTCG 4378
Query 109567 CT----AATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGA- 109621
|| ||||||||||||||||||||| || |||| || | |||||| | | ||
Sbjct 4379 CTGAGAAATTTCCCAGACAGTCTTGTATAAGGCTTTGACTTCCGCCGGAATG-CTAGGAA 4437
Query 109622 TGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGAC 109681
| | |||| |||||||| | | ||| | | |||||| | | ||||| ||||
Sbjct 4438 TACTCTGAACGGAGCCACCCTCGGCGATGATGCGGTTCTTCATATTATCAGACCATAGAC 4497
Query 109682 CGACCTTTTTGAGATCGTCAACAAGATGCTTG--TTGACCACGACAAATTCACCAGCAAG 109739
| | | ||||| | | ||| | || ||||| || |||||||| || |
Sbjct 4498 CTAGATCGACCAGATCCTTCAGAAGC--CATGGATTGACGACTTGGAATTCACCGGCTAA 4555
Query 109740 TGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGAT 109799
|| || ||| ||||| | ||||||||| ||||| || || || ||||| || ||
Sbjct 4556 AACACGACGAGAGTAAATGTTCGACGTGTAGGGCTCGAAGCATTCGTTATTGCCCAGAAT 4615
Query 109800 TTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT-TCG 109858
|| | || || || ||||||||||||||||| |||||||| || | ||| | | |
Sbjct 4616 CTGCGAGGTACTGGCGGTCGGCATGGGAGCCATGAGGAGACTGTTGCGTACACCATGTTG 4675
Query 109859 TCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCAT 109918
| || | | |||| | | |||| || || || || | ||| || |
Sbjct 4676 T-TTGATCTGCTCCTTGAGGGTAGCCCAGTCCCAAAGATCAG---AGGGAGTGACA---T 4728
Query 109919 CCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACG 109978
|||||| || ||||| | || | || | ||||||| |||| | || | ||| |
Sbjct 4729 TCCACATGTCATACTGAAGAATGCCTTGAGAAACAGGAGAGCCCTCGTAAGTAGAGTAAG 4788
Query 109979 ACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAA 110038
|| || ||| || | ||| ||| || | || ||||| ||||| |||||||
Sbjct 4789 TACCTTCTTCCTTAGCAATCTCCATTGATGCAGTCAAAGCGGCATGGTACATGGTCTCAA 4848
Query 110039 AAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAA 110098
|||| || || | | |||| || | || || || | | | || |
Sbjct 4849 AAATCTGCTTGTTGAGCTGTCGAGCTTCGGGCGATTCAAAAGGCATGCGGAGAGCAAGGA 4908
Query 110099 ACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTC 110158
| ||| ||||||||||| |||||||||||||| ||||| || |||||| | |
Sbjct 4909 AGGTATCGGCTAGACCCTGGACACCGAGACCAATAGGGCGGTGGCGCATGTTGCTGTTAC 4968
Query 110159 GAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAG 110218
| || || || || ||| ||||||||| | || ||||| | |||
Sbjct 4969 GTGCCTCAGGGACAGGATAGTGGTTTGCGTCGATGACTCTGTTCAGATTGCGCACAACAA 5028
Query 110219 TCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATT 110278
| || | || || || || | |||| | ||| || | | | || |
Sbjct 5029 CTTGGGTTACCTCGTGCAGCTTTTGAAAATCATAGCTTTCCGAGTTATAGTCCACGAAGG 5088
Query 110279 TGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCA 110338
|| | ||| || || || | ||||| |||| | || ||| | |||| || |
Sbjct 5089 ACGGTAAAGCCATGGATGCCAAGTTGCAAACAGCAACTTCATCTGGAGCACTGTACTCAA 5148
Query 110339 AAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTG- 110397
|| || || || | || ||||| ||| ||||| ||||||||| || |||
Sbjct 5149 TGATCTCAGTGCAGAGATTAGAACTACGAATTGTACCCAGGTTCTTCTGGTTGCTCTTGC 5208
Query 110398 GAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGA 110457
|| | || || ||||| ||||||||| | ||| | ||||| || ||||| | || |||
Sbjct 5209 GATTGGCGTGG-TCCTTGTAGAGCATGAAGGGGTTTCCAGTCTCTGTCTGAGCCTCTAGA 5267
Query 110458 ATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTA 110516
||||| | ||| | | || | ||| | || | || |||| || | || ||
Sbjct 5268 ATGGCATACCAGAGCTTCTG-GGCTTTTATCGTCTGGCGGCCGCGACCCTCAGCTTCATA 5326
Query 110517 CTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTC 110576
||| ||| | | | ||||| || | ||||| ||||| | |||||| || ||
Sbjct 5327 CTTCTCGTAGAGGGCTTCAAACTCATCACCGTAGACATCGGCAAGACCAGCACACTCGTT 5386
Query 110577 GGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAAT 110636
|| || | || | ||| | || || |||||| | ||||||||||| ||||||||
Sbjct 5387 CGGGCACATCAGTGTCCAGCTGCCGTTCTTCTCAACTCGTTTCATGAACAGATCAGGAAT 5446
Query 110637 CCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAG 110696
||| | || ||| |||||||| |||| | || || | ||| ||||| || ||
Sbjct 5447 CCAAAGGGCTAGGAAGAGGTCACGAGCACGAACTTCCTCTTTACCGTGGTTCTTTCGCAG 5506
Query 110697 CTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTT 110756
|||| || || | | |||||||||||| |||||||| || | ||| | | |||
Sbjct 5507 ATCCAGGAACTCAAATACATCCGAGTGCCACGGTTCGAGGTAAATAGCAAAAGCGCCCGG 5566
Query 110757 ACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGG 110813
|| | ||| | || | || ||||| || ||| |||||||| | | ||| ||
Sbjct 5567 TCGTTTATTACCACCTTGATCGACGTAGCGGGCGGTGTTGTTGAAGACGCGTAACATGGG 5626
Query 110814 AATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTC 110873
| || |||| || ||||| ||||| ||| || ||||||| ||
Sbjct 5627 GACGATGCCATTCGACGTGCCATTGGTACCGGCAATGTAAGAGCCCGTGGCACGGATACG 5686
Query 110874 GTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGT 110933
|| | || || ||||| || || ||| ||| ||| ||||| | | || ||
Sbjct 5687 ATGTACATTCAGGCCAATTCCGCCAGCCATCTTGGAAATCATAGCACATGTTTTAAGGGT 5746
Query 110934 ACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTG 110993
||||||| || ||||| ||| | || || | | | ||||| |||||||||||
Sbjct 5747 GTCATAAATGCCCTCAATACTATCATCTTTCATGTCGACCAAGAAGCAGGAAGACATCTG 5806
Query 110994 AGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTT--GG 111051
||| | || ||||| |||||||| |||||||| | ||||| ||| || || ||
Sbjct 5807 AGGCTGCGGGGTTCCAGCATTGAACAGTGTAGGGGAAGCATGGGTGA--AGTATTTGAGG 5864
Query 111052 GACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCA 111111
||||| |||||| || ||||| | ||||| | || |||||| | ||
Sbjct 5865 GACATGAGGTTGTAGGTCTCGAGGACTTTCTCAACATCGTCTCCCCAAATACCTACCGCC 5924
Query 111112 ACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCAT 111154
|| ||||||| ||| | ||||| | |||| | ||||||||
Sbjct 5925 ACACGCATGATCATGTGCTGAGGTCTCTCGACAATCTTTCCAT 5967
>seq883
Length=50859
Score = 125 bits (138), Expect = 8e-24
Identities = 281/416 (68%), Gaps = 21/416 (5%)
Strand=Plus/Plus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
||||| ||||| || || || | | ||| | ||||| | ||| || | ||| ||| |
Sbjct 49050 CGATCAAAACGGCCAGGTCGCATCAAAGCCTGGTCAAGCACATCTACTCTGTTGGTACCA 49109
Query 11563 GCAATGACTACAA--TGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620
|||| ||| || | ||| || || | | |||||||||||| ||||| || | ||| |
Sbjct 49110 GCAAGGACAACGACCTGCTCGT-TCGTATT-GAAACCGTCCATCTCTGTAAGGATCTGAT 49167
Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCC----GAACGCTTCTTA 11676
||| || || || |||||||| | || ||| | ||| ||||| ||
Sbjct 49168 TGAGGGTAGCCTCCCGTTCATCGTTACCGC-CAAACCTCTGGCCTTCAGAACGAGCTCTA 49226
Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG 11736
|||| ||||| || |||||||| || | ||| || || ||| ||| ||
Sbjct 49227 CCGATGGCGTCGATTTCATCGATAAAGATGATGCATGGCGCGTTCTTACGCGCAGTAGAA 49286
Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796
||||| || || || | | || || || || ||||||||||| || || | ||
Sbjct 49287 AAAAGGTCGCGCACTCTCGAGGCACCTACGCCGACGAACATCTCCACAAATT------CA 49340
Query 11797 GAACA-CTGAATG-----AAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGA 11850
|||| |||| | ||||| || |||||| ||||| ||||| || || ||
Sbjct 49341 GAACCGCTGACGGTAAAAAAGGGCACGCCAGACTCGCCAGCAGTGGCTTTTGCCAGCAGC 49400
Query 11851 GTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906
|||||||| |||||||||| ||| || |||| |||||||| ||||||||||||||
Sbjct 49401 GTCTTACCAGTACCAGGTGGACCTGCAAGAATAGCGCCACGAGGGATCTTGGCACC 49456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588963049890200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |