Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1239 107 2e-17 >seq1239 Length=29790 Score = 107 bits (118), Expect = 2e-17 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | ||||| || ||||| || ||||| || || ||||||||||| || |||| Sbjct 10777 ATGCCGTCGTCACTGTTCCTGCATACTTCAATGATTCCCAGCGTCAAGCTACCAAGGATG 10836 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || | ||| |||| |||||||| || ||| | |||| || ||||||||||| || | Sbjct 10837 CAGGTCAGATTTCTGGTCTTAATGTCCTGCGTGTGGTCAACGAGCCTACTGCTGCCGCTC 10896 Query 550518 TTGCATATGGACTTGATAA 550536 ||||||| || || || || Sbjct 10897 TTGCATACGGTCTGGAGAA 10915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029202976146910