Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1413 95.1 8e-14
seq1239 91.5 1e-12
>seq1413
Length=23416
Score = 95.1 bits (104), Expect = 8e-14
Identities = 115/154 (75%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
|||||| |||||||||||||| ||||| | ||||| || || ||||| || || |||||
Sbjct 19854 ATCTTCCAGTTGCTTTCCAGCGAAAATCAATCGTTGCTGGTCTGGAGGGATGCCCTCCTT 19913
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735
||| |||||||| |||||| || ||||| || | | | | | ||| ||| |
Sbjct 19914 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCCGAAGACTCCACCTCCAA-GGTGA 19972
Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || || ||||||||||||||||| || ||
Sbjct 19973 TGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTG 20006
Score = 91.5 bits (100), Expect = 1e-12
Identities = 156/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAG 480609
||| |||||||| || || || || ||| || || | ||| ||||| ||| ||||
Sbjct 19049 ACGGAGACGGAGCACTAGGTGGAGAGTAGACTCCTTCTGGATATTGTAATC-GCTCAGAG 19107
Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669
||| |||||| || ||||| ||||| || ||||| || || || || |||||||| |
Sbjct 19108 TTCGACCATCTTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCTGGAGGAATAC 19167
Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCA 480728
|||||||||| |||||||| || || ||||| ||||| | | | | || ||
Sbjct 19168 CTTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCAATGGTATCTGACGATTCCACTTCCA 19227
Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| ||| || || || || || | ||||| ||||| || ||
Sbjct 19228 A-GGTGATGGTCTTTCCTGTCAATGTCTTGACGAAGATCTG 19267
>seq1239
Length=29790
Score = 91.5 bits (100), Expect = 1e-12
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || | |||||||| ||||| || |||||||| || |||||||| || || ||||
Sbjct 10777 ATGCCGTCGTCACTGTTCCTGCATACTTCAATGATTCCCAGCGTCAAGCTACCAAGGATG 10836
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| || ||| | ||||||||||| | ||| | | || || || || || ||||| |
Sbjct 10837 CAGGTCAGATTTCTGGTCTTAATGTCCTGCGTGTGGTCAACGAGCCTACTGCTGCCGCTC 10896
Query 474855 TTGCTTATGGTCTTGATAAG 474874
|||| || ||||| || |||
Sbjct 10897 TTGCATACGGTCTGGAGAAG 10916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268103747955332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |