Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1336 190 2e-43
>seq1336
Length=25880
Score = 190 bits (210), Expect = 2e-43
Identities = 887/1392 (64%), Gaps = 27/1392 (2%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| || || | || || || || || |||| |||
Sbjct 5947 CCTCAGCACATGATCATGCGTGTGGCGGTAGGTATTTGGGGAGACGATGTTGAGAAAGTC 5888
Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| ||||| ||| || ||||||| | || |||| || || | || || || ||
Sbjct 5887 CTCGAGACCTACAACCTCATGTCCCTCAAATAC-TTCACCCATGCTTCCCCTACACTGTT 5829
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||||||||| || || || |||||||| |||||| | ||| || || || ||
Sbjct 5828 CAATGCTGGAACCCCGCAGCCTCAGATGTCTTCCTGCTTCTTGGTCGACATGAAAGATGA 5769
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
|| | || || |||| || |||| ||||| || || ||| ||||||
Sbjct 5768 TAGTATTGAGGGCATTTATGACACCCTTAAAACATGTGCTATGATTTCCAAGATGGCTGG 5709
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510
|| ||||| || | | ||| | | | |||| ||| ||| || || ||
Sbjct 5708 CGGAATTGGCCTGAATGTACATCGTATCCGTGCCACGGGCTCTTACATTGCCGGTACCAA 5649
Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570
||| || |||| || | || ||| | ||||| || ||| ||| || ||||| ||
Sbjct 5648 TGGCACGTCGAATGGCATCGTCCCCATGTTACGCGTCTTCAACAACACCGCCCGCTACGT 5589
Query 75571 AAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGC 75627
|||||| || | || ||| | | || | ||| | ||||| ||||| |
Sbjct 5588 CGATCAAGGTGGTAATAAACGACCGGGCGCTTTTGCTATTTACCTCGAACCGTGGCACTC 5529
Query 75628 CGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAG 75687
||| | | |||||||| || | ||| ||||| ||| | || || | ||| | |
Sbjct 5528 GGATGTATTTGAGTTCCTGGATCTGCGAAAGAACCACGGTAAAGAGGAAGTTCGTGCTCG 5469
Query 75688 AGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGG 75747
|| ||||| | |||| |||||||| || || |||||||| || |||||| || ||
Sbjct 5468 TGACCTCTTCCTAGCCCTTTGGATTCCTGATCTGTTCATGAAACGAGTTGAGAAGAACGG 5409
Query 75748 TCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGA 75807
||| | || | || || || || | ||||| |||| | ||||| ||
Sbjct 5408 CAGCTGGACACTGATGTGCCCGAACGAGTGTGCTGGTCTTGCCGATGTCTACGGTGATGA 5349
Query 75808 GTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGC 75867
|||||||||||||||| |||||||||| |||||| | | | ||| || |||
Sbjct 5348 GTTTGAAGCCCTCTACGAGAAGTATGAAGCTGAGGGTCGCGGCCGCCAGACGATAAAAGC 5289
Query 75868 CGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGC 75926
| | || | | ||| | || ||||| | | ||||| |||||||||| || | ||||
Sbjct 5288 C-CAGAAGCTCTGGTATGCCATTCTAGAGGCTCAGACAGAGACTGGAAACCCCTTCATGC 5230
Query 75927 TTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCT 75986
| |||||||| || ||||| ||||| ||||| |||| ||||| || |
Sbjct 5229 TCTACAAGGACCACGCCAATCGCAAGAGCAACCAGAAGAACCTGGGTACAATTCGTAGTT 5170
Query 75987 CAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATT 76046
| ||||| ||||| || || | ||||||| | | ||||| ||||||||||| |
Sbjct 5169 CTAATCTCTGCACTGAGATCATTGAGTACAGTGCTCCAGATGAAGTTGCTGTTTGCAACT 5110
Query 76047 TGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA-GACTCG--CACTTTTGATTATG 76103
||||||| || || | || || || || | ||||| | | ||||| |
Sbjct 5109 TGGCATCCATGGCTTTACC---GTCCTTCGTGGACTATAACTCGGAAAGCTATGATTTTC 5053
Query 76104 AAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAA 76163
|||| || || || | || | ||||| ||||| ||| ||||||| ||| ||
Sbjct 5052 AAAAGCTGCACGAGGTAACCCAAGTTGTTGTGCGCAATCTGAACAGAGTCATCGACGCAA 4993
Query 76164 ATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTT 76220
| ||||| || |||| || || || || ||||| ||| | |||||||||
Sbjct 4992 ACCACTATCCTGTCCCTGAG---GCACGTAACAGCAACATGCGCCACCGCCCTATTGGTC 4936
Query 76221 TGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATG 76280
| ||||| || ||||| || ||| || || |||| | ||||| || |
Sbjct 4935 TCGGTGTCCAGGGTCTAGCCGATACCTTCCTTGCTCTCCGCATGCCTTTTGAATCGCCCG 4876
Query 76281 AAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGC-- 76338
|||| || | || | || ||||| |||||||| || || | || ||
Sbjct 4875 AAGCTCGACAGCTCAACAAGCAGATTTTTGAGACCATGTACCATGCCGCTTTGACTGCAT 4816
Query 76339 GAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTC 76398
| | | || | ||| | | ||||| | || || | ||||| ||||| | ||
Sbjct 4815 CAATGGAGA--TTGCTAAGGAAGAAGGTACTTACTCTACTTACGAGGGCTCTCCTGTTTC 4758
Query 76399 CCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACGACTGG 76456
||||| | ||||||| ||| |||| |||| || | || || | | | ||||||
Sbjct 4757 TCAAGGCATTCTTCAGTATGACATGT-GGAATGTCACTCC-CTCTGATCTTTGGGACTGG 4700
Query 76457 GATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCA 76516
| | |||||||| | ||||| | | ||| | || |||||||| | ||||| ||
Sbjct 4699 GCTACCCTCAAGGAGCAGATCAAACAACATGGTGTACGCAACAGTCTCCTCATGGCTCCC 4640
Query 76517 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACA 76576
||||| || ||| ||| | || || |||| ||||| |||||||| || || |||||
Sbjct 4639 ATGCCGACCGCCAGTACCTCGCAGATTCTGGGCAATAACGAATGCTTCGAGCCCTACACG 4580
Query 76577 ACAAACATCTAC 76588
| ||||| |||
Sbjct 4579 TCGAACATTTAC 4568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596556482925920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |