Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq1413 100 6e-16
>seq1413
Length=23416
Score = 100 bits (110), Expect = 6e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | | ||| | || || |||| |||| ||| || || || || ||
Sbjct 19269 ATACCACCACGCAAACGAAGCACCAAGTGTAGCGTAGACTCCTTCTGAATGTTGTAGTCG 19328
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||| | || |||| || |||||||| ||||| | || ||||||||| ||
Sbjct 19329 CTTAGAGTTCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGTCGCTGTTGATCGGGA 19388
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || | ||||| || || | ||||| |||||
Sbjct 19389 GGGATACCTTCCTTGTCTTGGATCTTGCTCTTTACGTTGTCGATGGTGTCTGAAGATTCG 19448
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|||||||||||||| || || || || | || || | || || |||||
Sbjct 19449 ACTTCTAGAGTAATCGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 19498
Score = 96.9 bits (106), Expect = 7e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 192319 AGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGT 192378
||||| | |||| || | ||||| ||| || |||||| ||||| | |||||
Sbjct 19053 AGACGGAGCACTAGGTGGAGAGTAGACTCCTTCTGGATATTGTAATCGCTCAGAGTTCGA 19112
Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438
|||| |||| || |||||||| ||||| | | ||| || || || || || |||||
Sbjct 19113 CCATCTTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCTGGAGGAATACCTTCC 19172
Query 192439 TTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTA 192498
|| || || || || | || || || || | |||||||||||| ||||| | ||
Sbjct 19173 TTGTCCTGAATCTTGCTCTTCACGTTGTCAATGGTATCTGACGATTCCACTTCCAAGGTG 19232
Query 192499 ATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| || || || ||||| || | || ||||||||
Sbjct 19233 ATGGTCTTTCCTGTCAATGTCTTGACGAAGATCTGCAT 19270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984457812589650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |