Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1336 116 1e-20
seq1314 109 2e-18
seq1008 105 2e-17
>seq1336
Length=25880
Score = 116 bits (128), Expect = 1e-20
Identities = 349/534 (65%), Gaps = 5/534 (1%)
Strand=Plus/Plus
Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029
||||| | ||||| ||||| || || || | ||| || | ||| | || ||
Sbjct 5481 TCCTCTTTACCGTGGTTCTTTCGCAGATCCAGGAACTCAAATACATCCGAGTGCCACGGT 5540
Query 156030 TCCAGATACATAGCAAAA-CTACCATTCCTCT--TGCCACCCTGATCTACATACCGAGCA 156086
|| || || ||||||||| | || || | | | ||||| ||||| || || || ||
Sbjct 5541 TCGAGGTAAATAGCAAAAGCGCCCGGTCGTTTATTACCACCTTGATCGACGTAGCGGGCG 5600
Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146
|| || |||||||| | || ||| || | || ||||| || ||||||||||| ||| |
Sbjct 5601 GTGTTGTTGAAGACGCGTAACATGGGGACGATGCCATTCGACGTGCCATTGGTACCGGCA 5660
Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TT 156205
|| | || || | | || | | ||| | || || ||||| || || | |||| ||
Sbjct 5661 ATGTAAGAGCCCGTGGCACGGATACGATGTACATTCAGGCCAATTCCGCCAG-CCATCTT 5719
Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265
||||| ||| ||| || | || | |||| || |||||| |||||||| |||
Sbjct 5720 GGAAATCATAGCACATGTTTTAAGGGTGTCATAAATGCCCTCAATACTATCATCTTTCAT 5779
Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325
| | |||| ||| | ||||| | || |||||||| ||||| ||||||||
Sbjct 5780 GTCGACCAAGAAGCAGGAAGACATCTGAGGCTGCGGGGTTCCAGCATTGAACAGTGTAGG 5839
Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385
| ||||| | || || || ||||| | ||| ||||| | |||||||
Sbjct 5840 GGAAGCATGGGTGAAGTATTTGAGGGACATGAGGTTGTAGGTCTCGAGGACTTTCTCAAC 5899
Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445
|| || ||||| | | || | ||| ||| |||||||| | ||| |||||
Sbjct 5900 ATCGTCTCCCCAAATACCTACCGCCACACGCATGATCATGTGCTGAGGTCTCTCGACAAT 5959
Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
| ||||| || |||||| || | || |||||||| || || ||||| ||
Sbjct 5960 CTTTCCATTGATCTTCAGAAGATACGATCGCTCCAGAGTCTTGAAGCCGAAGTA 6013
>seq1314
Length=81020
Score = 109 bits (120), Expect = 2e-18
Identities = 167/236 (71%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483
||| | |||||| ||| |||| || || | || | || || |||| ||| |
Sbjct 75975 ACAAATATGGACTCTGAAAGCGTCGGAAACTTCGAACAGTCGTTCCTTTAGGAAAGCTGC 76034
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
||||| || | |||||| |||||||| |||||||| |||||||||||||||||||| ||
Sbjct 76035 AGCACCATGAGCAATCATGCAATCACGTTCCATTTCTCCGAAACGAAGACCACCATCACG 76094
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATA--GGACCGATGGAGCGGCTA 251601
||| | ||| ||| ||||||| ||||| || | | || || || || || |
Sbjct 76095 AGCACGACCTTCGACAGGCTGCCGAGT--CATGATCTGTACCGGGCCACGGGCACGAGCA 76152
Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657
|| ||| |||| |||||||| || ||||||||| ||| ||| |||| |||
Sbjct 76153 TGGATCTTGTCATCCACCATATGTCGAAGTCGCTGGTAGTATGTGGGCCCGAAGAA 76208
>seq1008
Length=41606
Score = 105 bits (116), Expect = 2e-17
Identities = 150/210 (71%), Gaps = 6/210 (3%)
Strand=Plus/Plus
Query 133451 AAGAAATCTGACTGGGCTATTAAATGGATCCAGGA---CAAGCGTGCGAGTTTTGCTACT 133507
||||| ||||||||||| | || ||||| || ||| | ||| ||||||
Sbjct 1910 AAGAAGGCTGACTGGGCTCTAAAGTGGATTGCTGATCGCAA---TTCGACTTTTGCCCAA 1966
Query 133508 CGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATT 133567
||||| ||||||| |||| || || || || || ||||| ||||| ||| ||||||
Sbjct 1967 CGTCTGATTGCTTTCGCTGCCGTTGAAGGTATCTTCTTCAGCGGTGCTTTCGCCTCTATC 2026
Query 133568 TTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCA 133627
|| ||||| || ||||||||| | | || || ||| || |||||||| || || ||
Sbjct 2027 TTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGCCTGACCTTCTCTAACGAGCTCATCTCG 2086
Query 133628 AGGGACGAGGCACTTCACACCGAATTTGCC 133657
| ||||| | || |||||||| ||||||
Sbjct 2087 CGTGACGAAGGTCTCCACACCGACTTTGCC 2116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471784429370783
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |