Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1413 86.0 5e-12 >seq1413 Length=23416 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| || | ||||| || || ||||| | ||| || || Sbjct 19498 ATGCAAATCTTCGTCAAGACCCTCACCGGAAAGACGATTACTCTAGAAGTCGAATCTTCA 19439 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | ||||| ||||| ||||| ||||| | || |||||| Sbjct 19438 GACACCATCGACAACGTAAAGAGCAAGATCCAAGACAAGGAAGGTATCCCTCCCGATCAA 19379 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||||||| | || ||||| ||||||||||| | | |||| | || |||||| Sbjct 19378 CAGCGACTTATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGAACTCTAAGCGACTACAAC 19319 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 ||||| || || |||||| | ||| ||||| Sbjct 19318 ATTCAGAAGGAGTCTACGCTACACTTGGTG 19289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412832749579187