Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1413 149 4e-31
seq1001 147 1e-30
seq1368 107 1e-18
>seq1413
Length=23416
Score = 149 bits (164), Expect = 4e-31
Identities = 164/216 (76%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||||||| | |||||||||||||| ||||| ||||| || | | |||| |||| |||
Sbjct 19801 ACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCC 19860
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
||||||||||| ||||| |||| ||||||||||||| | || | ||||||||||| |
Sbjct 19861 AGTTGCTTTCCAGCGAAAATCAATCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGA 19920
Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGT 34944
|| || ||||| || | ||||| || | ||| || || | ||| |||||
Sbjct 19921 ATCTTGGACTTGAC--AT--TGTCGATAGTGTCCGAAGACTCCACCTCCAAGGTGATGGT 19976
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
||| || ||||| ||||| || ||||||||||||||
Sbjct 19977 CTTGCCAGTGAGAGTCTTAACGAAGATCTGCATGAT 20012
Score = 84.2 bits (92), Expect = 1e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || ||||| | ||||||||||||||| ||||| ||||| || | || | ||
Sbjct 19514 CAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCACTGAGTGTTCGGCCGTC 19573
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||||||||| || |||| || |||||||| | || | ||||| |||||
Sbjct 19574 CTCGAGCTGCTTTCCGGCAAAAATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCTTTGTC 19633
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | || | || || |||| || || ||
Sbjct 19634 CTGAATCTTCGACTTGACGTTGTCGATAGTGTCCGAAGATTCAACCTCAAGTGTGATCGT 19693
Query 34945 CTTTCCCGTGAGGGTCTTTAC 34965
|||||| || |||||||| ||
Sbjct 19694 CTTTCCAGTCAGGGTCTTGAC 19714
>seq1001
Length=42108
Score = 147 bits (162), Expect = 1e-30
Identities = 166/220 (75%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || ||||| | ||||||||||||||| ||||| ||||| || ||| | || | ||
Sbjct 35596 CAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTC 35537
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| |||||||||||||| ||||||||||| | || | |||||||||||
Sbjct 35536 CTCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCGGGGGGGATGCCCTCCTTGTC 35477
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940
| || || ||||| || | ||||| || | | ||| || || | ||| |
Sbjct 35476 CTGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCGCTCGACTCCACCTCGAGGGTGA 35421
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
| ||||| |||||||||||||| || ||||||||||||||
Sbjct 35420 TAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 35381
>seq1368
Length=24850
Score = 107 bits (118), Expect = 1e-18
Identities = 141/193 (73%), Gaps = 8/193 (4%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || ||| | || | || || || ||||| ||||||||||
Sbjct 8267 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 8208
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
| || || ||||| || | || | ||||||||||| | || || || || ||
Sbjct 8207 TAAGACGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTCAC--AT- 8151
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| || || |||||| || | ||| |||||||| ||||||||||||||
Sbjct 8150 -TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 8092
Query 34964 ACAAAGATCTGCA 34976
|| ||||||||||
Sbjct 8091 ACGAAGATCTGCA 8079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325685817858821
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |