Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq1470 100 2e-15
seq1239 93.3 3e-13
>seq1470
Length=74857
Score = 100 bits (110), Expect = 2e-15
Identities = 205/301 (68%), Gaps = 13/301 (4%)
Strand=Plus/Plus
Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253
|||||||||||||| || | | |||| || | |||||| |||| || | ||
Sbjct 1598 TCAAAATCTTCACCACCTAGATGGGTATCACCAGCGGTAGCTAGAACTTCAAACACACCT 1657
Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAA---AATAA-G 282309
|| || | ||| | ||| | ||||| || |||||||| | |||| | ||||| |
Sbjct 1658 TCATCGATAGATAGAAGGGAGACATCGNAAGTACCACCACCAAGATCATACACAATAATG 1717
Query 282310 T-ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368
| || ||| | |||||| || ||||| || |||| ||||||||| || |
Sbjct 1718 TGACGCTCACCA-TCAGTCTTG-------TCTAGACCGTAGGCAATAGCAGCAGCGGTAG 1769
Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428
| || |||| || | || ||||| ||||||||||| | || ||||| || ||||| |
Sbjct 1770 GCTCGTTAACGATACGCAGCACATTGAGACCAGCAATGATACCGGCATCCTTGGTGGCCT 1829
Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTC 282488
|||| || ||||| || || || |||||||| | ||||| | ||| || | ||| |
Sbjct 1830 GTCTCTGGTTGTCGTTGAAGTAGGCGGGAACAGTGACGACGGCGTGTGTGACCTTTTTAC 1889
Query 282489 C 282489
|
Sbjct 1890 C 1890
>seq1239
Length=29790
Score = 93.3 bits (102), Expect = 3e-13
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394
|| || ||||| || |||| ||| |||||||| || || || | | | || ||||||
Sbjct 10915 TTCTCCAGACCGTATGCAAGAGCGGCAGCAGTAGGCTCGTTGACCACACGCAGGACATTA 10856
Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454
||||||| ||| |||||||| || || ||||| | || ||||| || || ||||||
Sbjct 10855 AGACCAGAAATCTGACCTGCATCCTTGGTAGCTTGACGCTGGGAATCATTGAAGTATGCA 10796
Query 282455 GGAACAGTAATAACGGCAT 282473
|||||||| | |||||||
Sbjct 10795 GGAACAGTGACGACGGCAT 10777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740544040533534
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |