Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1336 152 1e-31
seq1008 96.9 8e-15
>seq1336
Length=25880
Score = 152 bits (168), Expect = 1e-31
Identities = 353/529 (67%), Gaps = 5/529 (1%)
Strand=Plus/Minus
Query 110469 CATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGA-CAATTGGCTTCTTGCTT 110527
|||||| | ||||| || || || || ||||| | || || || |||| |||||
Sbjct 5848 CATGCTTCCCCTACACTGTTCAATGCTGGAACCCC-GCAGCCTCAGATGTCTTCCTGCTT 5790
Query 110528 TCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGC 110587
| | | || || |||||| |||||| || |||||||| | |||||| | |||
Sbjct 5789 CTTGGTCGACATGAAAGATGATAGTATTGAGGGCATTTATGACACCCTTAAAACATGTGC 5730
Query 110588 TCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGG 110647
| | ||||| || | |||| |||||||| | | || ||| ||| || | | ||
Sbjct 5729 TATGATTTCCAAGATGGCTGGCGGAATTGGCCTGAATGTACATCGTATCCGTGCCACGGG 5670
Query 110648 AGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTT 110707
| | || || | || || | || | ||| | || || |||||| | |||||
Sbjct 5669 CTCTTACATTGCCGGTACCAATGGCACGTCGAATGGCATCGTCCCCATGTTACGCGTCTT 5610
Query 110708 CAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTAT 110764
|||| |||| || || || ||||||||||||| | || ||| | ||||||||
Sbjct 5609 CAACAACACCGCCCGCTACGTCGATCAAGGTGGTAATAAACGACCGGGCGCTTTTGCTAT 5550
Query 110765 CTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGG 110824
|| |||||||| ||||| || ||| ||||||| ||| | || || || || || || ||
Sbjct 5549 TTACCTCGAACCGTGGCACTCGGATGTATTTGAGTTCCTGGATCTGCGAAAGAACCACGG 5490
Query 110825 ATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCAT 110884
|| ||| | || ||||| | || || | |||||| | ||| | |||||
Sbjct 5489 TAAAGAGGAAGTTCGTGCTCGTGACCTCTTCCTAGCCCTTTGGATTCCTGATCTGTTCAT 5430
Query 110885 GAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCT 110944
|||||| ||| | | || |||| ||| | || ||||| || | | | |||||||
Sbjct 5429 GAAACGAGTTGAGAAGAACGGCAGCTGGACACTGATGTGCCCGAACGAGTGTGCTGGTCT 5370
Query 110945 ATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAA 110993
| ||||| || || | |||||||||| ||| ||||| || ||||||
Sbjct 5369 TGCCGATGTCTACGGTGATGAGTTTGAAGCCCTCTACGAGAAGTATGAA 5321
>seq1008
Length=41606
Score = 96.9 bits (106), Expect = 8e-15
Identities = 268/405 (66%), Gaps = 26/405 (6%)
Strand=Plus/Plus
Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846
||||||| ||| ||||| || || |||||| | || |||||| | |||| ||| |
Sbjct 1896 TTCCTGCCATTCGCAAGAAGGCTGACTGGGCTCTAAAGTGGATT---GCTGAT--CGCAA 1950
Query 131847 AT----TTTTCTACAA-GACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGG 131901
| |||| ||| | || | ||||| ||| ||||||||||| ||||| ||
Sbjct 1951 TTCGACTTTTGCCCAACGTCTGATTGCTTTCGCTGCCGTTGAAGGTATCTTCTTCAGCGG 2010
Query 131902 TGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTC 131961
||||||| ||||||| ||||| ||||||||||| ||||||| || || | || ||
Sbjct 2011 TGCTTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGCCTGACCTTCTC 2070
Query 131962 CAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTATAG 132021
|| | |||||||| | || |||| | || || || ||||| ||||| |
Sbjct 2071 TAACGAGCTCATCTCGCGTGACGAAGGTCTCCACACCGACTTTGC-----CTGTCTATTG 2125
Query 132022 AAAATTTGC----TGATAAACTTG---ATGAAAATAATATTA-AACAACTTATAAGCGAA 132073
||| | ||| ||| | | ||| | | || || | |||| |||
Sbjct 2126 ---TTTTCCCACTTGAAGAACCGGCCCAGCAAAGAAGTCGTAGAAGCAGTTATCGTCGAT 2182
Query 132074 GCAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATG 132133
|| || |||||| | || || | ||||| ||| | |||||| | || | || |||
Sbjct 2183 GCCGTGAGGATCGAGCAAGAATTCCTGACAGAGGCTCTACCTTGCGGTCTGCTCGGTATG 2242
Query 132134 AATGCTGACTCTATGAAGGAGTACATTGAATTCGTTGCTGATCGT 132178
||||| || |||||| |||||||||| ||||| || ||||||
Sbjct 2243 AATGCAAACCTCATGAAGCAGTACATTGAGTTCGTGGCCGATCGT 2287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186786052577399
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |