Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1413 123 6e-23
>seq1413
Length=23416
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | |||||||| || ||||| |||||||||||| || ||
Sbjct 19267 CAGATCTTCGTCAAGACATTGACAGGAAAGACCATCACCTTGGAAGTGGAATCGTCAGAT 19208
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || ||||| ||| || ||| ||
Sbjct 19207 ACCATTGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGTATTCCTCCAGACCAGCAG 19148
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| ||||||||||| || |||||| |||||||||| | ||| || ||||||||| ||
Sbjct 19147 CGCCTTATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGAACTCTGAGCGATTACAATATC 19088
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||||||||| ||||| ||
Sbjct 19087 CAGAAGGAGTCTACTCTCCACCTAGT 19062
Score = 104 bits (114), Expect = 6e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||| ||||| ||||| ||| | ||||| ||| ||| ||||| ||||
Sbjct 19484 CAAGACCCTCACCGGAAAGACGATTACTCTAGAAGTCGAATCTTCAGACACCATCGACAA 19425
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|||||| ||||| ||||| || ||||| || || || || ||||||||||
Sbjct 19424 CGTAAAGAGCAAGATCCAAGACAAGGAAGGTATCCCTCCCGATCAACAGCGACTTATCTT 19365
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || |||||| |||| || || | ||| | ||| |||||| | ||||| |||||
Sbjct 19364 CGCTGGTAAGCAGCTGGAGGACGGCCGAACTCTAAGCGACTACAACATTCAGAAGGAGTC 19305
Query 206364 TACTCTTCAC 206373
||| || |||
Sbjct 19304 TACGCTACAC 19295
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
|| ||||| ||||||||||| ||||||| ||| || || || ||| | |||||||||
Sbjct 19062 ACTAGGTGGAGAGTAGACTCCTTCTGGATATTGTAATCGCTCAGAGTTCGACCATCTTCC 19121
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||||| || ||||||||||| || || ||
Sbjct 19122 AGCTGCTTACCAGCGAAGATAAGGCGCTGCTG 19153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181794165083039
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |