Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1413 123 6e-23 >seq1413 Length=23416 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | |||||||| || ||||| |||||||||||| || || Sbjct 19267 CAGATCTTCGTCAAGACATTGACAGGAAAGACCATCACCTTGGAAGTGGAATCGTCAGAT 19208 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || || ||||| ||| || ||| || Sbjct 19207 ACCATTGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGTATTCCTCCAGACCAGCAG 19148 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| || |||||| |||||||||| | ||| || ||||||||| || Sbjct 19147 CGCCTTATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGAACTCTGAGCGATTACAATATC 19088 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||||||||| ||||| || Sbjct 19087 CAGAAGGAGTCTACTCTCCACCTAGT 19062 Score = 104 bits (114), Expect = 6e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| ||||| ||||| ||| | ||||| ||| ||| ||||| |||| Sbjct 19484 CAAGACCCTCACCGGAAAGACGATTACTCTAGAAGTCGAATCTTCAGACACCATCGACAA 19425 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 |||||| ||||| ||||| || ||||| || || || || |||||||||| Sbjct 19424 CGTAAAGAGCAAGATCCAAGACAAGGAAGGTATCCCTCCCGATCAACAGCGACTTATCTT 19365 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||| |||| || || | ||| | ||| |||||| | ||||| ||||| Sbjct 19364 CGCTGGTAAGCAGCTGGAGGACGGCCGAACTCTAAGCGACTACAACATTCAGAAGGAGTC 19305 Query 206364 TACTCTTCAC 206373 ||| || ||| Sbjct 19304 TACGCTACAC 19295 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 || ||||| ||||||||||| ||||||| ||| || || || ||| | ||||||||| Sbjct 19062 ACTAGGTGGAGAGTAGACTCCTTCTGGATATTGTAATCGCTCAGAGTTCGACCATCTTCC 19121 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| || ||||||||||| || || || Sbjct 19122 AGCTGCTTACCAGCGAAGATAAGGCGCTGCTG 19153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181794165083039