Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1336 111 2e-18
seq1008 98.7 1e-14
>seq1336
Length=25880
Score = 111 bits (122), Expect = 2e-18
Identities = 213/314 (68%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 259868 GAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCC 259927
||| | || |||| |||||| | |||||| | | | |||||| || | ||
Sbjct 5896 GAGAAAGTCCTCGAGACCTACAACCTCATGTCCCTCAAATACTTCACCCATGCTTCCCCT 5837
Query 259928 ACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATG 259987
|| || || ||||| || || |||| || |||| || || ||||| || | ||||||
Sbjct 5836 ACACTGTTCAATGCTGGAACCCCGCAGCCTCAGATGTCTTCCTGCTTCTTGGTCGACATG 5777
Query 259988 AAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAG 260047
|| | ||| || |||||||| |||||||| || || || || | || ||||||
Sbjct 5776 AAAGATGATAGTATTGAGGGCATTTATGACACCCTTAAAACATGTGCTATGATTTCCAAG 5717
Query 260048 GCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCG 260107
||| ||||| || || | | ||| | || ||| ||||| | ||| | ||
Sbjct 5716 ATGGCTGGCGGAATTGGCCTGAATGTACATCGTATCCGTGCCACGGGCTCTTACATTGCC 5657
Query 260108 GGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCG 260167
|| ||||| ||| ||| || ||| | || |||||| | ||||| || ||| |||| ||
Sbjct 5656 GGTACCAATGGCACGTCGAATGGCATCGTCCCCATGTTACGCGTCTTCAACAACACCGCC 5597
Query 260168 CGCTACGTCGACCA 260181
||||||||||| ||
Sbjct 5596 CGCTACGTCGATCA 5583
>seq1008
Length=41606
Score = 98.7 bits (108), Expect = 1e-14
Identities = 187/267 (70%), Gaps = 9/267 (3%)
Strand=Plus/Plus
Query 1456517 AAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCG 1456576
|||||| | |||||||| ||||| ||||||| |||| || | | ||| | || ||
Sbjct 2166 AAGCAGTT-ATCGTCGATGCCGTGAGGATCGAGCAAGAATTCCTGACAGAGGCTCTACC- 2223
Query 1456577 GTGGCGCTCA--TCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGC 1456634
| ||| || |||| ||||| || | | |||||| ||||||||||| || || ||
Sbjct 2224 -TTGCGGTCTGCTCGGTATGAATGCAAAC-CTCATGAAGCAGTACATTGAGTTC-GTGGC 2280
Query 1456635 CGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCC 1456694
||| || ||||| | || | ||| | ||||| |||||| | |||||||||||
Sbjct 2281 CGATCGTCTGCTTGTCGCTTTGGGCAATG-AGAAGGTCTACCGCTCTACCAACCCGTTCG 2339
Query 1456695 CATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCG 1456753
| |||||| || ||||||| |||||||| ||||| ||||| ||||| || |
Sbjct 2340 ATTTCATGGAGAACATTTCGCTCGGTGGCAAGACAAACTTCTTCGAAAAGCGCGTCGGTG 2399
Query 1456754 AGTACGCCAAGGCCGGCGTCACCGCCA 1456780
| ||| |||||||| || | ||||
Sbjct 2400 ATTACCAGAAGGCCGGTGTTATGGCCA 2426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177641541216958
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |