Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1413 122 9e-23
seq1001 118 1e-21
seq1368 89.7 5e-13
>seq1413
Length=23416
Score = 122 bits (134), Expect = 9e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563
||| | ||||||||| || ||||| |||||||||||||||| | || | ||| ||
Sbjct 19289 CACCAAGTGTAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTTAGAGTTCGGCCGTCCTC 19348
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
||||| || || || || || | ||||| |||||||| || || ||||| || |||||
Sbjct 19349 CAGCTGCTTACCAGCGAAGATAAGTCGCTGTTGATCGGGAGGGATACCTTCCTTGTCTTG 19408
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|| || || || ||| | ||||| || ||||| || || |||||||| || ||
Sbjct 19409 GATCTTGCTCTTTACGTTGTCGATGGTGTCTGAAGATTCGACTTCTAGAGTAATCGTCTT 19468
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| | || || ||||| ||||||||
Sbjct 19469 TCCGGTGAGGGTCTTGACGAAGATTTGCAT 19498
Score = 114 bits (126), Expect = 1e-20
Identities = 150/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||| ||||| || ||| ||||| || ||||||||||| | | || |
Sbjct 19509 AGGCGCAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCACTGAGTGTTCGG 19568
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| || || ||||||||||| |||||||| ||||| || ||||| |||
Sbjct 19569 CCGTCCTCGAGCTGCTTTCCGGCAAAAATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCT 19628
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || ||||| ||| | ||||| || ||||| || || || ||
Sbjct 19629 TTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTGTCCGAAGATTCAACCTCAAGTGTG 19688
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGA 134703
|| || || || || | || || ||||
Sbjct 19689 ATCGTCTTTCCAGTCAGGGTCTTGACGA 19716
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| |||| || ||||| || ||||| || ||| ||||| || ||||||||||| | |
Sbjct 19783 CCACCTCGCAGACGCAATACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 19842
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| |||| | || || || || || || || |||||||| || ||||| || || ||
Sbjct 19843 AA-GGTGCGGCCATCTTCCAGTTGCTTTCCAGCGAAAATCAATCGTTGCTGGTCTGGAGG 19901
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
||||| || || || ||||| || ||||| ||| | ||||| || || |||||
Sbjct 19902 GATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCCGAAGACTCCAC 19961
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || ||||| || || || | ||| |||||||| || |||||
Sbjct 19962 CTCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 20009
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| ||||| || || || ||||| || || ||||| ||||
Sbjct 19044 CCGCCACGGAGACGGAGCACTAGGTGGAGAGTAGACTCCTTCTGGATATTGTAATCGCTC 19103
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || || || ||||| || || || || || | |||||||| || || ||
Sbjct 19104 AGAGTTCGACCATCTTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCTGGAGGA 19163
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || || ||||| || || || ||| | || || |||||||||||
Sbjct 19164 ATACCTTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCAATGGTATCTGACGATTCCACT 19223
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || ||||| || || || || || || ||||| || |||||
Sbjct 19224 TCCAAGGTGATGGTCTTTCCTGTCAATGTCTTGACGAAGATCTGCAT 19270
>seq1001
Length=42108
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||||||||| || ||| ||||| || |||||||||||| | ||| |
Sbjct 35601 AGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGG 35542
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| ||||| || || |||| ||| ||||| ||||| || ||||| ||
Sbjct 35541 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCGGGGGGGATGCCCTCC 35482
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | |||||| ||| ||||| ||||| ||
Sbjct 35481 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCGAGGGTG 35422
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || | || || ||||| || |||||
Sbjct 35421 ATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 35384
>seq1368
Length=24850
Score = 89.7 bits (98), Expect = 5e-13
Identities = 133/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || |||||||||||| | ||| | ||| || ||||| ||||| || || |
Sbjct 8267 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 8208
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
| | |||||||||||| || || || || || || || || || || || || ||
Sbjct 8207 TAAGACGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGT 8148
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | |||||||| || || || ||||| || ||||| || || || | || || ||||
Sbjct 8147 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 8088
Query 134704 AAATTTGCA 134712
| || ||||
Sbjct 8087 AGATCTGCA 8079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505387287552680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |