Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1336 206 3e-48
>seq1336
Length=25880
Score = 206 bits (228), Expect = 3e-48
Identities = 895/1394 (64%), Gaps = 31/1394 (2%)
Strand=Plus/Plus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| ||||| | ||||| || || |||||||| ||||| |||| || || | |||
Sbjct 4568 GTAAATGTTCGACGTGTAGGGCTCGAAGCATTCGTTATTGCCCAGAATCTGCGAGGTACT 4627
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
||| || ||||| || ||||| | |||||||| || | ||| | | ||||| | ||
Sbjct 4628 GGCGGTCGGCATGGGAGCCATGAGGAGACTGTTGCGTACACCATGTTGTTTGATCTGCTC 4687
Query 110827 CTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884
|||||| | ||||||| | | | || || | || |||| |||||||| |||||
Sbjct 4688 CTTGAGGGTAGCCCAGTCCCAAAGATCAGAG-GGAGTGACATTCC-ACATGTCATACTGA 4745
Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944
|| | ||||| || | ||||| ||||| | || || | ||||| | | |||
Sbjct 4746 AGAATGCCTTGAGAAACAGGAGAGCCCTCGTAAGTAGAGTAAGTACCTTCTTCCTTAGCA 4805
Query 110945 AATTC-ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003
| || | | | || || | || || |||||||| ||||| || | || |
Sbjct 4806 ATCTCCATTGAT-GCAGTCAAAGCGGCATGGTACATGGTCTCAAAAATCTGCTTGTTGAG 4864
Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 111063
|| ||||| || ||||| | |||| || || ||| || |||||
Sbjct 4865 CTGTCGAGCTTCGGGCGATTCAAAAGGCATGCGGAGAGCAAGGAAGGTATCGGCTAGACC 4924
Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---AC 111120
|| ||||| | ||||||||| | ||| ||||| || || || || |||| ||
Sbjct 4925 CTGGACACCGAGACCAATAGGGCGGTGGCGCATGTTGCTGTTACGTGC---CTCAGGGAC 4981
Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180
||||| ||| ||| ||||||| ||| ||||| ||||| | || | ||
Sbjct 4982 AGGATAGTGGTTTGCGTCGATGACTCTGTTCAGATTGCGCACAACAACTTGGGTTACCTC 5041
Query 111181 ATGAAGTTTTTCATAATCAAAAGTG--CGAGTC-TCTTCATTGACATACTTTGGAAGGGC 111237
|| || |||| | ||||| | | ||||| | || || || || | ||
Sbjct 5042 GTGCAGCTTTTGAAAATCATAGCTTTCCGAGTTATAGTCCACGAAGGAC---GGTAAAGC 5098
Query 111238 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 111297
|| |||||||| ||||||||||| ||||| | | ||||||| | || || ||
Sbjct 5099 CATGGATGCCAAGTTGCAAACAGCAACTTCATCTGGAGCACTGTACTCAATGATCTCAGT 5158
Query 111298 ACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGC 111357
|| | || ||||| ||| || |||| ||||| ||||| ||||| |||
Sbjct 5159 GCAGAGATTAGAACTACGAATTGTACCCAGGTTCTTCTGGTTGCTCTTGCGATTGGCGTG 5218
Query 111358 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417
||||||||||||||| |||| | || ||||| ||||| | | ||||| || | |||
Sbjct 5219 GTCCTTGTAGAGCATGAAGGGGTTTCCAGTCTCTGTCTGAGCCTCTAGAATGGCATACCA 5278
Query 111418 -AACATCGGCGGCTGGTA--CAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474
| | || | |||| || ||||| | | || ||||| || || ||||| |||
Sbjct 5279 GAGCTTCTG-GGCTTTTATCGTCTGGCG--GCCGCGACCCTCAGCTTCATACTTCTCGTA 5335
Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534
||||||||||||||| ||||| | |||| ||||| | || || || || |
Sbjct 5336 GAGGGCTTCAAACTCATCACCGTAGACATCGGCAAGACCAGCACACTCGTTCGGGCACAT 5395
Query 111535 AAGAGACCA-TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 111593
|| | ||| || | ||| |||||| || |||||||| || || |||||||| ||||
Sbjct 5396 CAGTGTCCAGCTGCCGTTCTT-CTCAACTCGTTTCATGAACAGATCAGGAATCCAAAGGG 5454
Query 111594 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 111653
| ||||| || | | ||| | || || | ||| ||||| ||| | || ||||
Sbjct 5455 CTAGGAAGAGGTCACGAGCACGAACTTCCTCTTTACCGTGGTTCTTTCGCAGATCCAGGA 5514
Query 111654 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---AC 111710
|||| | | ||||| |||||| || || || || | || | || ||| ||| |
Sbjct 5515 ACTCAAATACATCCGAGTGCCACGGTTCGAGGTAAATAGCAAAAGCGCCCGGTCGTTTAT 5574
Query 111711 GCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATAC 111770
||| |||||| || ||||| || ||| ||| || ||||| | ||| || | || |
Sbjct 5575 TACCACCTTGATCGACGTAGCGGGCGGTGTTGTTGAAGACGCGTAACATGGGGACGATGC 5634
Query 111771 CATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGT 111830
||| || ||||| || || ||| ||| |||| | | | ||| | |
Sbjct 5635 CATTCGACGTGCCATTGGTACCGGCAATGTAAGAGCCCGTGGCACGGATACGATGTACAT 5694
Query 111831 GCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGA 111890
|| ||||| || |||||| ||| || || ||||| |||| || |||| |
Sbjct 5695 TCAGGCCAATTCCGCCAGCCATCTTGGAAATCATAGCACATGTTTTAAGGGTGTCATAAA 5754
Query 111891 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 111950
| || | || || || || || ||| | |||||| |||||||| || |
Sbjct 5755 TGCCCTCAATACTATCATCTTTCATGTCGACCAAGAAGCAGGAAGACATCTGAGGCTGCG 5814
Query 111951 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTG 112009
| || ||||||||||| || || || | || || |||| || | ||||||| |
Sbjct 5815 GGGTTCCAGCATTGAACAGTGTAGGGGAAGCATGGGTGAA-GTATTTGAGGGACATGAGG 5873
Query 112010 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATG 112069
| ||| ||||| | ||| |||| || || || || || | || || ||||||
Sbjct 5874 TTGTAGGTCTCGAGGACTTTCTCAACATCGTCTCCCCAAATACCTACCGCCACACGCATG 5933
Query 112070 AACATGTACTGTGG 112083
| ||||| ||| ||
Sbjct 5934 ATCATGTGCTGAGG 5947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628018191146400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |