Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq883 125 9e-24 >seq883 Length=50859 Score = 125 bits (138), Expect = 9e-24 Identities = 285/420 (68%), Gaps = 13/420 (3%) Strand=Plus/Plus Query 14055 TGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGT 14114 |||| | |||||||| || || || || | | || | |||||| | ||| | | || Sbjct 49042 TGATATGTCGATCAAAACGGCCAGGTCGCATCAAAGCCTGGTCAAGCACATCTACTCTGT 49101 Query 14115 TCGTCGCCGCGATGACAACGA--TGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAA 14172 | || | || | |||||||| ||| ||| |||| | ||| || |||||||| || | Sbjct 49102 TGGTACCAGCAAGGACAACGACCTGCTCGT-TCGTATTGAAA-CCGTCCATCTCTGTAAG 49159 Query 14173 GAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCACCCGCACTGCGTT- 14231 || ||||||| ||| || |||||||| || | | || ||| | || | | Sbjct 49160 GATCTGATTGAGGGTAGCCTCCCGTTCATCGTTACC-GCCAAACCTCTGGCCTTCAGAAC 49218 Query 14232 --GCT-TACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGG 14288 ||| |||||| |||||| ||||||||||| || | ||| ||||| || | ||| | Sbjct 49219 GAGCTCTACCGATGGCGTCGATTTCATCGATAAAGATGATGCATGGCGCGTTCTTACGCG 49278 Query 14289 CAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAAT 14348 || ||| | || ||||||||| |||||| || || || |||||||||||||| | Sbjct 49279 CAGTAGAAAAAAGGTCGCGCACTCTCGAGGCACCTACGCCGACGAACATCTCCACAAATT 49338 Query 14349 TGG--CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAG 14406 | | || || | | ||||| ||| ||| || || || ||||| || || Sbjct 49339 CAGAACCGCTGACGGT--AAAAAAGGGCACGCCAGACTCGCCAGCAGTGGCTTTTGCCAG 49396 Query 14407 GAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 || ||||| || || || ||| ||||| |||| || ||||| |||||| ||||||| Sbjct 49397 CAGCGTCTTACCAGTACCAGGTGGACCTGCAAGAATAGCGCCACGAGGGATCTTGGCACC 49456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618421602156040