Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq883 125 9e-24
>seq883
Length=50859
Score = 125 bits (138), Expect = 9e-24
Identities = 285/420 (68%), Gaps = 13/420 (3%)
Strand=Plus/Plus
Query 14055 TGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGT 14114
|||| | |||||||| || || || || | | || | |||||| | ||| | | ||
Sbjct 49042 TGATATGTCGATCAAAACGGCCAGGTCGCATCAAAGCCTGGTCAAGCACATCTACTCTGT 49101
Query 14115 TCGTCGCCGCGATGACAACGA--TGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAA 14172
| || | || | |||||||| ||| ||| |||| | ||| || |||||||| || |
Sbjct 49102 TGGTACCAGCAAGGACAACGACCTGCTCGT-TCGTATTGAAA-CCGTCCATCTCTGTAAG 49159
Query 14173 GAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCACCCGCACTGCGTT- 14231
|| ||||||| ||| || |||||||| || | | || ||| | || | |
Sbjct 49160 GATCTGATTGAGGGTAGCCTCCCGTTCATCGTTACC-GCCAAACCTCTGGCCTTCAGAAC 49218
Query 14232 --GCT-TACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGG 14288
||| |||||| |||||| ||||||||||| || | ||| ||||| || | ||| |
Sbjct 49219 GAGCTCTACCGATGGCGTCGATTTCATCGATAAAGATGATGCATGGCGCGTTCTTACGCG 49278
Query 14289 CAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAAT 14348
|| ||| | || ||||||||| |||||| || || || |||||||||||||| |
Sbjct 49279 CAGTAGAAAAAAGGTCGCGCACTCTCGAGGCACCTACGCCGACGAACATCTCCACAAATT 49338
Query 14349 TGG--CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAG 14406
| | || || | | ||||| ||| ||| || || || ||||| || ||
Sbjct 49339 CAGAACCGCTGACGGT--AAAAAAGGGCACGCCAGACTCGCCAGCAGTGGCTTTTGCCAG 49396
Query 14407 GAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466
|| ||||| || || || ||| ||||| |||| || ||||| |||||| |||||||
Sbjct 49397 CAGCGTCTTACCAGTACCAGGTGGACCTGCAAGAATAGCGCCACGAGGGATCTTGGCACC 49456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618421602156040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |