Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1336 298 6e-76
seq1008 109 6e-19
>seq1336
Length=25880
Score = 298 bits (330), Expect = 6e-76
Identities = 916/1394 (66%), Gaps = 33/1394 (2%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| ||||||| ||||| | |||||| || || || |||| |||
Sbjct 5947 CCTCAGCACATGATCATGCGTGTGGCGGTAGGTATTTGGGGAGACGATGTTGAGAAAGTC 5888
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || ||||||| | || |||| || || | || || || ||
Sbjct 5887 CTCGAGACCTACAACCTCATGTCCCTCAAATAC-TTCACCCATGCTTCCCCTACACTGTT 5829
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||||||||| || || || || ||||| |||||| | ||| || || || ||
Sbjct 5828 CAATGCTGGAACCCCGCAGCCTCAGATGTCTTCCTGCTTCTTGGTCGACATGAAAGATGA 5769
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
|| | || || |||| || |||| ||||| || || ||| ||||||
Sbjct 5768 TAGTATTGAGGGCATTTATGACACCCTTAAAACATGTGCTATGATTTCCAAGATGGCTGG 5709
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
|| ||||| || | | ||| | | | |||| ||| ||| || || ||
Sbjct 5708 CGGAATTGGCCTGAATGTACATCGTATCCGTGCCACGGGCTCTTACATTGCCGGTACCAA 5649
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
||| || |||| || | || ||| | ||||| || ||| ||| || ||||| ||
Sbjct 5648 TGGCACGTCGAATGGCATCGTCCCCATGTTACGCGTCTTCAACAACACCGCCCGCTACGT 5589
Query 104581 AAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 104637
|||||| ||| | ||| ||| || | || | || || || || |||||| |
Sbjct 5588 CGATCAAGGTGGTAATAAACGACCGGGCGCTTTTGCTATTTACCTCGAACCGTGGCACTC 5529
Query 104638 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-C 104696
|||| | | |||||||| || |||| ||||| ||| | ||||| | || ||| |
Sbjct 5528 GGATGTATTTGAGTTCCTGGATCTGCGAAAGAACCACGGTAAAGAGGAAGTTCG-TGCTC 5470
Query 104697 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 104756
| || |||||| || || |||||||| ||||| |||||||| |||||||| ||| |
Sbjct 5469 GTGACCTCTTCCTAGCCCTTTGGATTCCTGATCTGTTCATGAAACGAGTTGAGAAGAACG 5410
Query 104757 GCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816
||| ||| | || | || || || || ||||||| |||||| | ||||| |
Sbjct 5409 GCAGCTGGACACTGATGTGCCCGAACGAGTGTGCTGGTCTTGCCGATGTCTACGGTGATG 5350
Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGTGCC 104874
||||||||||||| ||| ||||| || | || |||| ||| | || |||| |
Sbjct 5349 AGTTTGAAGCCCTCTACGAGAAGTATGAAGCTGAGGGTC--GCGGCCGCCAGACGATAAA 5292
Query 104875 AGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACA 104933
||| | || | | ||| | || ||||| || |||| || |||||||| | || | ||
Sbjct 5291 AGC-CCAGAAGCTCTGGTATGCCATTCTAGAGGCTCAGACAGAGACTGGAAACCCCTTCA 5233
Query 104934 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGA 104993
|||| ||||| ||| | || | ||||| || || ||||| ||||| || |
Sbjct 5232 TGCTCTACAAGGACCACGCCAATCGCAAGAGCAACCAGAAGAACCTGGGTACAATTCGTA 5173
Query 104994 GTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTA 105053
|||| |||||||| || || ||| | || | | | |||||| ||||| || |
Sbjct 5172 GTTCTAATCTCTGCACTGAGATCATTGAGTACAGTGCTCCAGATGAAGTTGCTGTTTGCA 5113
Query 105054 ACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--TTTGATTA 105111
|| | ||||| || ||| | || | ||||| | | | || || | | |||||
Sbjct 5112 ACTTGGCATCCATGGCTTTACCGTCCTTCGTGGA-CTATA-ACTCGGAAAGCTATGATTT 5055
Query 105112 TGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAG 105171
| |||| || ||||| || || || ||| || || |||||||| || ||
Sbjct 5054 TCAAAAGCTGCACGAGGTAACCCAAGTTGTTGTGCGCAATCTGAACAGAGTCATCGACGC 4995
Query 105172 AAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228
||| || || || |||| || ||||| || ||| | ||||| || |||||
Sbjct 4994 AAACCACTATCCTGTCCCTGAG---GCACGTAACAGCAACATGCGCCACCGCCCTATTGG 4938
Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGA 105288
||||||||| |||||||| || ||| ||| || | ||| | ||||| ||
Sbjct 4937 TCTCGGTGTCCAGGGTCTAGCCGATACCTTCCTTGCTCTCCGCATGCCTTTTGAATCGCC 4878
Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC 105348
|||||| | |||| || || |||||||||||||| || |||||| |||| |
Sbjct 4877 CGAAGCTCGACAGCTCAACAAGCAGATTTTTGAGACCATGTACCATGCCGCT-TTGA--C 4821
Query 105349 GAGTTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405
||| ||| | || ||| || ||| | || || | ||||| ||||| |
Sbjct 4820 TGCATCAATGGAGATTGCTAAGGAAGAAGGTACTTACTCTACTTACGAGGGCTCTCCTGT 4761
Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGAC 105463
||| ||||| | ||||| | ||| |||| |||| || | || || || | |||
Sbjct 4760 TTCTCAAGGCATTCTTCAGTATGACATGT-GGAATGTCACTCC-CTCTGATCTTTGGGAC 4703
Query 105464 TGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523
|||| | |||||||| | ||||| | | ||| | || ||||||||||||||||||
Sbjct 4702 TGGGCTACCCTCAAGGAGCAGATCAAACAACATGGTGTACGCAACAGTCTCCTCATGGCT 4643
Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583
|| ||||| || ||| ||| | || || |||| ||||| |||||||| || ||||||
Sbjct 4642 CCCATGCCGACCGCCAGTACCTCGCAGATTCTGGGCAATAACGAATGCTTCGAGCCCTAC 4583
Query 105584 ACGACGAACATCTA 105597
||| ||||||| ||
Sbjct 4582 ACGTCGAACATTTA 4569
>seq1008
Length=41606
Score = 109 bits (120), Expect = 6e-19
Identities = 154/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 94744 ATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTG---ATACAAAGTCGCGTTCCTTT 94800
|||| ||||| || || |||||| | |||||| ||| || || ||| || ||
Sbjct 1904 ATTCGCAAGAAGGCTGACTGGGCTCTAAAGTGGATTGCTGATCGCAATTCGACTT---TT 1960
Query 94801 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 94860
|| | || || | || || || ||||| |||||||||||| ||| | ||| |
Sbjct 1961 GCCCAACGTCTGATTGCTTTCGCTGCCGTTGAAGGTATCTTCTTCAGCGGTGCTTTCGCC 2020
Query 94861 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 94920
|||| | |||||||||||||| ||||| ||||| || || |||||| ||||||||
Sbjct 2021 TCTATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGCCTGACCTTCTCTAACGAGCTC 2080
Query 94921 ATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||||| |||||||| || |||||| || |||||
Sbjct 2081 ATCTCGCGTGACGAAGGTCTCCACACCGACTTTGC 2115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583247975553160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |