Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq948 95.1 1e-14 >seq948 Length=99277 Score = 95.1 bits (104), Expect = 1e-14 Identities = 213/307 (69%), Gaps = 20/307 (7%) Strand=Plus/Plus Query 6727 GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786 ||||||||| ||| || | |||||||| || || |||||| ||||| ||| Sbjct 85018 GACGTAGAACTGGGCGAACATATGGCACGGCGGAAGGGCCATCTTCTTCAGATCAGCCGG 85077 Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGG---GTTCCGCTTCAAGGTGTCGAT 6843 ||||| |||| | | ||| | | |||| || ||||||| | ||| || Sbjct 85078 ATTCCATGCGCTGAGGATGATGCGGCGATCATAGGGATTGTTCCGCAGCT---TGTGAAT 85134 Query 6844 CACGTACTGCA-GCTGGTC--CGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGAT 6899 ||| | | ||| |||| || ||| ||||| || | ||||| | |||||| || || | Sbjct 85135 CACTT-CAGCAAGCTGATCAACGC-CCCTG-CCTGTGTAGTCTGTCTTCGCATCCACG-T 85190 Query 6900 ACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCC 6959 | || || || || |||| ||| ||||| |||||||| ||||| | ||||| | || | Sbjct 85191 ATTCGGCGCCGAAATGTCGCCATTGGAATCCGTAGACAGGGCCAAGATCGCCGACTTCAC 85250 Query 6960 GA---GATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCT 7016 || ||| || || |||| |||||| || ||||| || |||| | |||||||||||| Sbjct 85251 GATGTGATAGG--CCGACGCT-GTCCAGGAATTCTCGTGATCCGTTACCGTCCCAGATCT 85307 Query 7017 TCACCCC 7023 | ||||| Sbjct 85308 TAACCCC 85314 Score = 95.1 bits (104), Expect = 1e-14 Identities = 213/307 (69%), Gaps = 20/307 (7%) Strand=Plus/Minus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381 ||||| ||||||||||||| | |||| || ||||| || |||||| |||| || || | Sbjct 85314 GGGGTTAAGATCTGGGACGGTAACGGATCACGAGAATTCCTGGAC-AGCGTCGG--CCTA 85258 Query 34382 TC---TCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGG 34438 || ||| || | ||||| | ||||| |||||||| ||||| ||| |||| || || Sbjct 85257 TCACATCGTGAAGTCGGCGATCTTGGCCCTGTCTACGGATTCCAATGGCGACATTTCGGC 85198 Query 34439 GCGGAGTATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCG--GACCAGC-TGCA 34494 || || || || || |||||| | ||||| | || ||||| ||| || |||| ||| Sbjct 85197 GCCGAATA-CGTGGATGCGAAGACAGACTACACAGG-CAGGG-GCGTTGATCAGCTTGCT 85141 Query 34495 GTACGTGATCGACACCTTGAAGCGGAAC---CCTGATGACAGAAGGATCGTGATGTGCGC 34551 | | ||||| ||| | ||||||| || |||| | | ||| | | |||| Sbjct 85140 G-AAGTGATTCACA---AGCTGCGGAACAATCCCTATGATCGCCGCATCATCCTCAGCGC 85085 Query 34552 GTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATT 34611 ||||| ||| ||||| |||||| || || |||||||| | || ||| || Sbjct 85084 ATGGAATCCGGCTGATCTGAAGAAGATGGCCCTTCCGCCGTGCCATATGTTCGCCCAGTT 85025 Query 34612 CTACGTC 34618 ||||||| Sbjct 85024 CTACGTC 85018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448252543830480