Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq948 95.1 1e-14
>seq948
Length=99277
Score = 95.1 bits (104), Expect = 1e-14
Identities = 213/307 (69%), Gaps = 20/307 (7%)
Strand=Plus/Plus
Query 6727 GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786
||||||||| ||| || | |||||||| || || |||||| ||||| |||
Sbjct 85018 GACGTAGAACTGGGCGAACATATGGCACGGCGGAAGGGCCATCTTCTTCAGATCAGCCGG 85077
Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGG---GTTCCGCTTCAAGGTGTCGAT 6843
||||| |||| | | ||| | | |||| || ||||||| | ||| ||
Sbjct 85078 ATTCCATGCGCTGAGGATGATGCGGCGATCATAGGGATTGTTCCGCAGCT---TGTGAAT 85134
Query 6844 CACGTACTGCA-GCTGGTC--CGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGAT 6899
||| | | ||| |||| || ||| ||||| || | ||||| | |||||| || || |
Sbjct 85135 CACTT-CAGCAAGCTGATCAACGC-CCCTG-CCTGTGTAGTCTGTCTTCGCATCCACG-T 85190
Query 6900 ACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCC 6959
| || || || || |||| ||| ||||| |||||||| ||||| | ||||| | || |
Sbjct 85191 ATTCGGCGCCGAAATGTCGCCATTGGAATCCGTAGACAGGGCCAAGATCGCCGACTTCAC 85250
Query 6960 GA---GATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCT 7016
|| ||| || || |||| |||||| || ||||| || |||| | ||||||||||||
Sbjct 85251 GATGTGATAGG--CCGACGCT-GTCCAGGAATTCTCGTGATCCGTTACCGTCCCAGATCT 85307
Query 7017 TCACCCC 7023
| |||||
Sbjct 85308 TAACCCC 85314
Score = 95.1 bits (104), Expect = 1e-14
Identities = 213/307 (69%), Gaps = 20/307 (7%)
Strand=Plus/Minus
Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381
||||| ||||||||||||| | |||| || ||||| || |||||| |||| || || |
Sbjct 85314 GGGGTTAAGATCTGGGACGGTAACGGATCACGAGAATTCCTGGAC-AGCGTCGG--CCTA 85258
Query 34382 TC---TCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGG 34438
|| ||| || | ||||| | ||||| |||||||| ||||| ||| |||| || ||
Sbjct 85257 TCACATCGTGAAGTCGGCGATCTTGGCCCTGTCTACGGATTCCAATGGCGACATTTCGGC 85198
Query 34439 GCGGAGTATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCG--GACCAGC-TGCA 34494
|| || || || || |||||| | ||||| | || ||||| ||| || |||| |||
Sbjct 85197 GCCGAATA-CGTGGATGCGAAGACAGACTACACAGG-CAGGG-GCGTTGATCAGCTTGCT 85141
Query 34495 GTACGTGATCGACACCTTGAAGCGGAAC---CCTGATGACAGAAGGATCGTGATGTGCGC 34551
| | ||||| ||| | ||||||| || |||| | | ||| | | ||||
Sbjct 85140 G-AAGTGATTCACA---AGCTGCGGAACAATCCCTATGATCGCCGCATCATCCTCAGCGC 85085
Query 34552 GTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATT 34611
||||| ||| ||||| |||||| || || |||||||| | || ||| ||
Sbjct 85084 ATGGAATCCGGCTGATCTGAAGAAGATGGCCCTTCCGCCGTGCCATATGTTCGCCCAGTT 85025
Query 34612 CTACGTC 34618
|||||||
Sbjct 85024 CTACGTC 85018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448252543830480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |