Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10] 1,759 sequences; 43,620,960 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq948 100 2e-16 >seq948 Length=99277 Score = 100 bits (110), Expect = 2e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 29609 GTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGG 29668 || || || || || ||||| | |||||||||||| | || | || || ||||| Sbjct 84746 GTTGGGAACGGCCTTGGCTCTCGCTCGAGCTGAATTTTGAGTGCATCGACATGGTCGCAA 84805 Query 29669 TAGACGTGAGCATCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 29727 |||||||| ||||| |||| | || | || || || || | | | || |||||| Sbjct 84806 TAGACGTGTGCATCGCCCATGACTTGTGTTAAGCTG-CCAGGAACCAACTCGCAGACGTG 84864 Query 29728 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCAT 29787 || | ||||| ||||| || | |||||||||||||| || || || ||||| ||||| Sbjct 84865 TGCAAGCATGTGGGTGAGCAGCGCATAGCTGGCGATGTTGAACGGAACGCCGAGACCCAT 84924 Query 29788 GTCCCCTGACCTCTGGTAGAGCTGGCA 29814 ||| | |||| |||||| ||||| || Sbjct 84925 GTCGCAGGACCGCTGGTACAGCTGACA 84951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406154492749474