Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq948 96.9 3e-15
>seq948
Length=99277
Score = 96.9 bits (106), Expect = 3e-15
Identities = 147/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 27103 GTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGG 27162
|| || || || || ||||| | |||||||||| | || || | || || || ||
Sbjct 84746 GTTGGGAACGGCCTTGGCTCTCGCTCGAGCTGAATTTTGAGTGCATCGACATGGTCGCAA 84805
Query 27163 TAGACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 27221
|||||||| || || |||| | || | || || || || | | | || ||||||
Sbjct 84806 TAGACGTGTGCATCGCCCATGACTTGTGTTAAGCTG-CCAGGAACCAACTCGCAGACGTG 84864
Query 27222 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCAT 27281
|| | ||||| ||||| || | |||||||||||||| || || || ||||| |||||
Sbjct 84865 TGCAAGCATGTGGGTGAGCAGCGCATAGCTGGCGATGTTGAACGGAACGCCGAGACCCAT 84924
Query 27282 GTCCCCCGACCTCTGGTAGAGCTGACA 27308
||| | |||| |||||| ||||||||
Sbjct 84925 GTCGCAGGACCGCTGGTACAGCTGACA 84951
Score = 87.8 bits (96), Expect = 1e-12
Identities = 234/351 (67%), Gaps = 14/351 (4%)
Strand=Plus/Plus
Query 27349 TGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATG 27408
|||||||| ||||| ||||| || || || ||||| |||| | |||||||
Sbjct 85040 TGGCACGGCGGAAGGGCCATCTTCTTCAGATCAGCCGGATTCCATGCGCTGAGGATGATG 85099
Query 27409 CGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCACGGCGTTTTGCA-GCTGATCCAC 27464
|| | || | || ||||||| | || | ||| || ||| ||||||| ||
Sbjct 85100 CGGCGATCATAGGGATTGTTCCGCAGCTTGTGAATCAC----TTCAGCAAGCTGATCAAC 85155
Query 27465 CCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTG 27524
||| | || | ||||||| | || ||| ||| || || |||||||| | ||||||
Sbjct 85156 GCCCCTGCCTGTGTAGTCTGTCTTCGCATCCACGTATTCGGCGCCGAAATGTCGCCATTG 85215
Query 27525 GAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCC--TGTGCTCGAAGCCCCTCTTGTCC 27582
||| ||||| || || || || || || |||| | |||| | | ||| |||||
Sbjct 85216 GAATCCGTAGACAGGGCCAAGATCGCCGACTTCACGATGTGATAG--GCCGACGCTGTCC 85273
Query 27583 AAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTG 27642
| || |||| || ||||| ||||||||||||| ||||| ||| || || | |
Sbjct 85274 AGGAATTCTCGTGATCCGTTACCGTCCCAGATCTTAACCCCGGCCTCCGACAGTGTTGTA 85333
Query 27643 GAGTTTGT-GGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 27692
|| || |||||| || ||||| || ||||| |||| ||||| ||
Sbjct 85334 GACGACGTATTCCCCTCT-ACAAACCAAAGTAGCTCGGCCACAACGGCTTT 85383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369499278573929
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |