Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kretzschmaria_20deusta_20[genbank_20GCA_5F002081935.2_202017-08-10]
1,759 sequences; 43,620,960 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1336 315 1e-80
seq1008 114 2e-20
>seq1336
Length=25880
Score = 315 bits (348), Expect = 1e-80
Identities = 1202/1858 (65%), Gaps = 42/1858 (2%)
Strand=Plus/Plus
Query 75365 TTCTT-ATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACAT 75423
||||| ||| | |||||| ||||| || | || | || ||| ||||| ||||||||
Sbjct 4178 TTCTTGATCAACCGTGAATTGAATAGGTTGAGCGGCAGCTTGTGTTCGTAGGTAGTACAT 4237
Query 75424 ACCAGTTTTTAGACCCAGACTCCATCC-GTAGAAATGCATGCTTGTTAGTTTGGAATAAC 75482
||||| || ||||| || |||| || ||| || |||||||| || | |||
Sbjct 4238 GCCAGTCTTCAGACCAAGCTTCCACCCAGTA-AAGTGCATGCTCGTGATCTTGCCCATTG 4296
Query 75483 TCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAG 75542
| || || ||||||||||| | || || ||||| |||||||| || | ||| |
Sbjct 4297 TGGGCTCCCTCATATGAATATTGAGTGATTGTGACTGATCAATGAAAGCACCACGATCGG 4356
Query 75543 CCGCCATTTTTA-TAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTG 75601
| ||||||| | || || || | ||| ||||||||| | ||| ||| | | ||||
Sbjct 4357 CAGCCATTTGCACTACTGTTCGCT-GAGAAATTTCCCAGACAGTCTTGTATAAGGCTTTG 4415
Query 75602 ATATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTC 75658
| || | |||| | | || | |||| ||| || || || | || || |||
Sbjct 4416 ACTTCCGCCGGAATGCTAGGAATACTCTGAACGGAGCCACCCTCGGCGATGATGCGGTTC 4475
Query 75659 TTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACA 75718
|| || | |||| ||| | | ||| | | | | || || ||||| ||
Sbjct 4476 TTCATATTATCAGACCATAGACCTAGATCGACCAGATCCTTCAGAAGCCATGGATTGACG 4535
Query 75719 ATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACA 75778
| ||| ||||| || | || || | |||| |||||| || || || || || |
Sbjct 4536 ACTTGGAATTCACCGGCTAAAACACGACGAGAGTAAATGTTCGACGTGTAGGGCTCGAAG 4595
Query 75779 GATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAA 75838
|||| || || |||| ||| || | || || |||||||| || |||| | | |
Sbjct 4596 CATTCGTTATTGCCCAGAATCTGCGAGGTACTGGCGGTCGGCATGGGAGCCATGAGGAGA 4655
Query 75839 CTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCT 75898
|| || | | ||||||| | |||| | || || || ||| |||||||||||
Sbjct 4656 CTGTTGCGTACACCATGTTGTTTGATCTGCTCCTTGAGGGTAGCCCAGTCCCAAAGATCA 4715
Query 75899 GATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTA 75958
|| || |||| ||| | || || || ||||| || | | || || || |
Sbjct 4716 GAGGGAGTGACATTCCACATGTCATACTGAAGAATGCCTTGAGAAACAGGAGAGCCCTCG 4775
Query 75959 TATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTC--GCCTCTAACGCACCGT 76016
|| || |||||| || || | | ||| | || | | | || || || | |
Sbjct 4776 TAAGTAGAGTAAGTACCTTCTTCCTTAGCAA--TCTCCATTGATGCAGTCAAAGCGGCAT 4833
Query 76017 AATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGAT 76076
|| || || || ||||||| ||| || || | | | ||||| | ||||||||
Sbjct 4834 GGTACATGGTCTCAAAAATCTGCTTGTTGAGCTGTCGAGCTTCGGGCGATTCAAAAGGCA 4893
Query 76077 AATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTC 76136
| | | || || | ||| ||||| ||||| || || | ||||||||| | || |
Sbjct 4894 TGCGGAGAGCAAGGAAGGTATCGGCTAGACCCTGGACACCGAGACCAATAGGGCGGTGGC 4953
Query 76137 TCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGA 76196
| | ||| | || || || | ||| || | || || || | | | || |
Sbjct 4954 GCATGTTGCTGTTACGTGCCTCAGGGACAGGATAGTGGTTTGCGTCGATGACTCTGTTCA 5013
Query 76197 GATTTCTGACAACTACTT---TAACCACGTCCTTTAGTTTGAGAAAATCAAAT-TTTCC- 76251
|||| | ||||| |||| | ||| ||| | || || |||||||| | |||||
Sbjct 5014 GATTGCGCACAACAACTTGGGTTACCTCGTGC---AGCTTTTGAAAATCATAGCTTTCCG 5070
Query 76252 ATCTAT----CACAAAC-ATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCA 76306
| ||| ||| || | ||| ||| || ||||| | || ||||| || || |||
Sbjct 5071 AGTTATAGTCCACGAAGGACGGTAA-AGCCATGGATGCCAAGTTGCAAACAGCAACTTCA 5129
Query 76307 TT---AGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCA 76363
| |||| || || | || ||||| ||||| |||||| || || || ||
Sbjct 5130 TCTGGAGCACTG---TACTCAATGATCTCAGTGCAGAGATTAGAACTACGAATTGTACCC 5186
Query 76364 AGATTTTGTTGGTTGCTCTTTTTGTTA-CATGAGTCCTTATAAAGAACAAACGGAGTTCC 76422
|| || | ||||||||||| || | || |||||| || || | || || ||||
Sbjct 5187 AGGTTCTTCTGGTTGCTCTTGCGATTGGCGTG-GTCCTTGTAGAGCATGAAGGGGTTTCC 5245
Query 76423 AGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG-CTTTTATTATAGATT 76481
||| || |||| | || | ||| | | ||||| | ||| | ||||||| |
Sbjct 5246 AGTCTCTGTCTGAGCCTCTAGAATGGCATACCAGA-GCTTCTGGGCTTTTATCGTCTGGC 5304
Query 76482 TGTATCGCTTCTCTCTTTCATA-TTGT-GTATATAACCGTTCAAATTCATCTCCCCAAAC 76539
| || ||| |||||| || | ||| | | |||||| ||||| || | ||
Sbjct 5305 GGCCGCGACCCTCAGCTTCATACTTCTCGTAGAGGGC--TTCAAACTCATCACCGTAGAC 5362
Query 76540 ATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCA-CTCACCATCTTCCTTAA 76598
||| | | ||||| ||| || ||||| ||||||| || ||| || | ||||| | ||
Sbjct 5363 ATCGGCAAGACCAGCACACTCGTTCGGGCACATCAGTGTCCAGCTGCCGTTCTTC-TCAA 5421
Query 76599 CCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTT 76658
| |||||||| || |||||||| ||||| || || | || || || || | | | ||
Sbjct 5422 CTCGTTTCATGAACAGATCAGGAATCCAAAGGGCTAGGAAGAGGTCACGAGCACGAACTT 5481
Query 76659 CTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTT 76718
| || || || |||||| ||||| |||||||| | | ||| || ||||| ||||
Sbjct 5482 CCTCTTTACCGTGGTTCTTTCGCAGATCCAGGAACTCAAATACATCCGAGTGCCACGGTT 5541
Query 76719 CTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAG 76778
| || || || || | | | ||||||||||||||||| || ||||| | || | ||| |
Sbjct 5542 CGAGGTAAATAGCAAAAGCGCCCGGTCGTTTATTACCACCTTGATCGACGTAGCGGGCGG 5601
Query 76779 TGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAA 76838
|||| || | || | ||||| || | ||||| || || || ||||| || || | ||
Sbjct 5602 TGTTGTTGAAGACGCGTAACATGGGGACGATGCCATTCGACGTGCCATTGGTACCGGCAA 5661
Query 76839 TATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAG 76898
| ||| || ||||| ||| | | | ||||| ||||| || ||||| || |
Sbjct 5662 TGTAAGAGCCCGTGGCACGGATACGATGTACATTCAGGCCAATTCCGCCAGCCATCTTGG 5721
Query 76899 AGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGT 76958
| || | |||||| ||| | |||||||| |||||||| ||||||||||| ||||||
Sbjct 5722 AAATCATAGCACATGTTTTAAGGGTGTCATAAATGCCCTCAATACTATCATCTTTCATGT 5781
Query 76959 TAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAG 77018
| | || ||| |||||| ||| | || ||||| ||||| |||| |||||| |
Sbjct 5782 CGACCAAGAAGCAGGAAGACATCTGAGGCTGCGGGGTTCCAGCATTGAACAGTGTAGGGG 5841
Query 77019 ATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATAT 77078
| ||||| ||||| |||| || | || ||||| || || | ||| || | ||
Sbjct 5842 AAGCATGGGTGAAGTATTTGAGGGACATGAGGTTGTAGGTCTCGAGGACTTTCTCAACAT 5901
Query 77079 CCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCT 77138
| | ||| ||||| || |||||||| | ||| |||||||||| || ||| |||
Sbjct 5902 CGTCTCCCCAAATACCTACCGCCACACGCATGATCATGTGCTGAGGTCTCTCGACAATCT 5961
Query 77139 TATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196
| ||| || |||| | || ||| |||| ||| || || || || || | |||
Sbjct 5962 TTCCATTGATCTTCAGAAGATACGATCGCTCCAGAGTCTTGAAGCCGAAGTATTGGTA 6019
>seq1008
Length=41606
Score = 114 bits (126), Expect = 2e-20
Identities = 336/515 (65%), Gaps = 7/515 (1%)
Strand=Plus/Minus
Query 46326 CATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 46385
|||||| || || ||||| ||||| || || || ||||| || || || ||||| |
Sbjct 2422 CATAACACCGGCCTTCTGGTAATCACCGACGCGCTTTTCGAAGAAGTTTGTCTTGCCACC 2363
Query 46386 CAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCC 46445
| || || || ||||| ||||| ||||| || ||| || | || | | ||
Sbjct 2362 GAGCGAAATGTTCTCCATGAAATCGAACGGGTTGGTAGAGCGGTAGACCTTCTCATTGCC 2303
Query 46446 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATT 46505
|| | || ||| | ||| || ||||| || || ||| ||||| | | |||
Sbjct 2302 CAAAGCGACAAGCAGACGATCGGCCACGAACTCAATGTACTGCTTCATGAGGTTTGCATT 2243
Query 46506 CATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGC 46565
||| || | || | ||||||||||| || || || ||||| || || | || ||
Sbjct 2242 CATACCGAGCAGACCGCAAGGTAGAGCCTCTGTCAGGAATTCTTGCTCGATCCTCACGGC 2183
Query 46566 ATC--CGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAAC 46623
||| ||||| | | | ||| ||| | || || | | | |||| || ||||
Sbjct 2182 ATCGACGATA--ACTGCTTCTACGACTTCTTTGCTGGGCCGGTTCTTCAAGTGGGAAAAC 2125
Query 46624 ATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAAT 46683
| || ||| ||||| || || || ||||| || | || | |||||||| ||
Sbjct 2124 AATAGACAGGCAAAGTCGGTGTGGAGACCTTCGTCACGCGAGATGAGCTCGTTAGAGAAG 2065
Query 46684 GTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAA 46743
|| || || ||||| || |||||||| |||||||| || |||| ||||||| ||
Sbjct 2064 GTCAGGCCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGCACCGCTG 2005
Query 46744 AAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCAT---CA 46800
||||| || ||||| || || ||||| || | || | | | || | | || |
Sbjct 2004 AAGAAGATACCTTCAACGGCAGCGAAAGCAATCAGACGTTGGGCAAAAGTCGAATTGCGA 1945
Query 46801 TTATGAATCCACCTTTGAGCCCAATCAGCCTTTTT 46835
| | ||||||| || ||||||| |||||||| ||
Sbjct 1944 TCAGCAATCCACTTTAGAGCCCAGTCAGCCTTCTT 1910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712918724354880
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