Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq6 143 6e-29
>seq6
Length=2952248
Score = 143 bits (158), Expect = 6e-29
Identities = 187/256 (73%), Gaps = 2/256 (1%)
Strand=Plus/Minus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
|| ||||| || || || || | ||| ||||||||| | || || | || |||||
Sbjct 1057273 ATTATTACCGAGGCTGTGGATATCGAGAAGGAGTTCCTCACGGATGCGCTGCCC-GTCGC 1057215
Query 230446 CTTATTGG-CATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504
| | ||| ||||||||| | || ||| | ||||||||||| ||||| ||||||||| |
Sbjct 1057214 CCTGCTGGGCATGAACGCCAACCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCT 1057155
Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564
| || || ||||| || |||| |||||| | | |||||||| | || |||||
Sbjct 1057154 GCTGGTGGCTCTTGGCAACAAGAAGTACTACAACGCGACCAACCCCTTCGACTTCATGGA 1057095
Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624
| ||| ||||| | || ||||||||||||||||| ||||| || ||||||| ||||
Sbjct 1057094 GAACATCTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTACCAGAA 1057035
Query 230625 GCCTGGTGTGATGAAG 230640
| | ||||| ||| ||
Sbjct 1057034 GGCAGGTGTCATGGAG 1057019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823606952270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |