Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6 143 6e-29 >seq6 Length=2952248 Score = 143 bits (158), Expect = 6e-29 Identities = 187/256 (73%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 || ||||| || || || || | ||| ||||||||| | || || | || ||||| Sbjct 1057273 ATTATTACCGAGGCTGTGGATATCGAGAAGGAGTTCCTCACGGATGCGCTGCCC-GTCGC 1057215 Query 230446 CTTATTGG-CATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 | | ||| ||||||||| | || ||| | ||||||||||| ||||| ||||||||| | Sbjct 1057214 CCTGCTGGGCATGAACGCCAACCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCT 1057155 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 | || || ||||| || |||| |||||| | | |||||||| | || ||||| Sbjct 1057154 GCTGGTGGCTCTTGGCAACAAGAAGTACTACAACGCGACCAACCCCTTCGACTTCATGGA 1057095 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 | ||| ||||| | || ||||||||||||||||| ||||| || ||||||| |||| Sbjct 1057094 GAACATCTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTACCAGAA 1057035 Query 230625 GCCTGGTGTGATGAAG 230640 | | ||||| ||| || Sbjct 1057034 GGCAGGTGTCATGGAG 1057019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823606952270