Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 5e-13 >seq6 Length=2952248 Score = 89.7 bits (98), Expect = 5e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 17228 TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCT 17287 ||| | || ||||| ||||| || || ||| | |||||||| ||||||||||| Sbjct 1057643 TCGCTGATGTACGTGTCGATCAGGAGCGAGTAGGTCTCGGAGTGAATGTTCTCCATCATG 1057702 Query 17288 ATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347 ||||| || ||||| ||||| ||||| || | || || || || | ||| || || Sbjct 1057703 ATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGAATCTGGACCTCGGAGCTGAAGCGCTCG 1057762 Query 17348 GCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 | || || |||||||||||||| || ||||||||| || || Sbjct 1057763 ACCAGGTTCTCGTTCACGATGCCATCCGACGCGGCGAAGAAAGC 1057806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545412389720