Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq6 89.7 5e-13
>seq6
Length=2952248
Score = 89.7 bits (98), Expect = 5e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 17228 TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCT 17287
||| | || ||||| ||||| || || ||| | |||||||| |||||||||||
Sbjct 1057643 TCGCTGATGTACGTGTCGATCAGGAGCGAGTAGGTCTCGGAGTGAATGTTCTCCATCATG 1057702
Query 17288 ATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347
||||| || ||||| ||||| ||||| || | || || || || | ||| || ||
Sbjct 1057703 ATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGAATCTGGACCTCGGAGCTGAAGCGCTCG 1057762
Query 17348 GCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391
| || || |||||||||||||| || ||||||||| || ||
Sbjct 1057763 ACCAGGTTCTCGTTCACGATGCCATCCGACGCGGCGAAGAAAGC 1057806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545412389720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |