Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq4 102 1e-16 >seq4 Length=4775223 Score = 102 bits (112), Expect = 1e-16 Identities = 203/298 (68%), Gaps = 2/298 (1%) Strand=Plus/Plus Query 145869 CACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCG 145927 ||||||||| || ||| | | |||||| || ||||||||||| |||||| |||| Sbjct 1682200 CACGTAGAATTGTGCAAAC-ATGTGGCAAGGGGGCAGGGCCATCTTCTTCAGGTCTGCCG 1682258 Query 145928 GGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCA 145987 | ||||| ||| | | || || | | | | || || |||| | || | || | Sbjct 1682259 GATTCCATGCGCTCATGATGATGCGGCGGTCATACGGCTTGTTCTTCAGCTTGTCGATGA 1682318 Query 145988 GGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGG 146047 || | |||||| || || || ||| || |||||||| | ||||| ||| | | Sbjct 1682319 CATCGGCCAACTGGTCAACACCTTGGCCCGTATAGTCTGTCTTCGCATCCACATACTCTG 1682378 Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCC 146107 | |||||||| | ||||||||| || || || || |||||||| || || | ||| Sbjct 1682379 CTCCGAAGTGTCGCCACTGGAAGCCATATACCGGGCCCAGGTCGCCCTCTTCGCGGTGAG 1682438 Query 146108 CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 ||| || | | | | ||||| || || || ||||| ||||||||||||| | ||| Sbjct 1682439 ACAGTCCCACGCTGTCAAGGAACTCGCGCGATCCGTTTCCGTCCCAGATCTTTATGCC 1682496 Score = 93.3 bits (102), Expect = 5e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 |||||| | |||||| | || ||||||| |||||||||||||||||| |||| | || Sbjct 1681945 CAGCTGCACCTTCAGCGCATCGACGTGGTCGAGGTAGACGTGCGCGTCACCCATGGTATG 1682004 Query 145731 GATGA-AGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGT 145789 | | ||||| ||| || ||| | || ||| || | ||||| || || || | | Sbjct 1682005 CGTCAGCGTCCCGGGGGTC-AGGTCACAGACGTGCGCTAGCATGTGCGTGAGAAGAGCAT 1682063 Query 145790 AGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGC 145849 | || |||||||| || || || || |||||||| | || ||||| || ||| ||| Sbjct 1682064 ACGACGCAATGTTGAAAGGGACGCCGAGACCCATGTCGCAAGACCGCTGATAAAGCAGGC 1682123 Query 145850 AGGAGAGCTCCCCGC 145864 || ||| |||||| Sbjct 1682124 AGTGCAGCACCCCGC 1682138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076586097160