Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 1e-16
>seq4
Length=4775223
Score = 102 bits (112), Expect = 1e-16
Identities = 203/298 (68%), Gaps = 2/298 (1%)
Strand=Plus/Plus
Query 145869 CACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCG 145927
||||||||| || ||| | | |||||| || ||||||||||| |||||| ||||
Sbjct 1682200 CACGTAGAATTGTGCAAAC-ATGTGGCAAGGGGGCAGGGCCATCTTCTTCAGGTCTGCCG 1682258
Query 145928 GGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCA 145987
| ||||| ||| | | || || | | | | || || |||| | || | || |
Sbjct 1682259 GATTCCATGCGCTCATGATGATGCGGCGGTCATACGGCTTGTTCTTCAGCTTGTCGATGA 1682318
Query 145988 GGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGG 146047
|| | |||||| || || || ||| || |||||||| | ||||| ||| | |
Sbjct 1682319 CATCGGCCAACTGGTCAACACCTTGGCCCGTATAGTCTGTCTTCGCATCCACATACTCTG 1682378
Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCC 146107
| |||||||| | ||||||||| || || || || |||||||| || || | |||
Sbjct 1682379 CTCCGAAGTGTCGCCACTGGAAGCCATATACCGGGCCCAGGTCGCCCTCTTCGCGGTGAG 1682438
Query 146108 CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165
||| || | | | | ||||| || || || ||||| ||||||||||||| | |||
Sbjct 1682439 ACAGTCCCACGCTGTCAAGGAACTCGCGCGATCCGTTTCCGTCCCAGATCTTTATGCC 1682496
Score = 93.3 bits (102), Expect = 5e-14
Identities = 139/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730
|||||| | |||||| | || ||||||| |||||||||||||||||| |||| | ||
Sbjct 1681945 CAGCTGCACCTTCAGCGCATCGACGTGGTCGAGGTAGACGTGCGCGTCACCCATGGTATG 1682004
Query 145731 GATGA-AGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGT 145789
| | ||||| ||| || ||| | || ||| || | ||||| || || || | |
Sbjct 1682005 CGTCAGCGTCCCGGGGGTC-AGGTCACAGACGTGCGCTAGCATGTGCGTGAGAAGAGCAT 1682063
Query 145790 AGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGC 145849
| || |||||||| || || || || |||||||| | || ||||| || ||| |||
Sbjct 1682064 ACGACGCAATGTTGAAAGGGACGCCGAGACCCATGTCGCAAGACCGCTGATAAAGCAGGC 1682123
Query 145850 AGGAGAGCTCCCCGC 145864
|| ||| ||||||
Sbjct 1682124 AGTGCAGCACCCCGC 1682138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076586097160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |