Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2 122 2e-22 >seq2 Length=6116231 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 254195 ACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGA 254254 ||||| || ||||| |||||| || | |||||||||||||||||| |||||| || Sbjct 885064 ACCCG--TGCCCGCCCTTCAAGATCATCGTCCTGGACGAGGCGGACAGCATGACACAGGA 885121 Query 254255 CGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCT 254314 ||||||| ||| || ||||| || ||||||||| |||| | ||||| || ||||| Sbjct 885122 CGCGCAGAGCGCGCTGCGCCGCACCATGGAGACGTACTCGCGCATCACGCGCTTCTGCCT 885181 Query 254315 GGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCG 254374 || ||||||||||| | ||||||| ||| || || || ||| ||||||| || Sbjct 885182 CGTCTGCAACTACGTCACCCGCATCATCGACCCCCTCGCGAGCCGTTGCTCCAAGTTCCG 885241 Query 254375 ATTCAGCACCCTCG 254388 |||| | ||||| Sbjct 885242 CTTCAAGAGCCTCG 885255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766001028672