Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq6 109 1e-18
>seq6
Length=2952248
Score = 109 bits (120), Expect = 1e-18
Identities = 282/424 (67%), Gaps = 13/424 (3%)
Strand=Plus/Minus
Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978
||||||| || || || || || |||||||| || || | ||||||||||| ||||||
Sbjct 1057470 TTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCTTTCGCATCCATCTTCTGGC 1057411
Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038
||||||| | ||| | |||| || || |||| ||| || ||| |||| || | ||||
Sbjct 1057410 TCAAGAAGCGTGGTCTCATGCCCGGCCTTACCTTCTCGAACGAGCTCATCTCCCGTGACG 1057351
Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTT---GAAAAAGGGTTTTGTTGATACCC 102095
| || | || ||||||||| ||| ||||||| | | | | || || |||
Sbjct 1057350 AGGGAATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCACA----TCAAGTCGAAGCCC 1057295
Query 102096 CATCAAGAGAAAGGATTCTTGAA-ATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154
| ||| | || ||| ||| | || || || || || || | || ||
Sbjct 1057294 AGCCCTGAG---GCCGTCGAGAAGATTATTACCGAGGCTGTGGATATCGAGAAGGAGTTC 1057238
Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214
||||| | | | ||||| || | |||| |||||| ||| | ||| ||||||||
Sbjct 1057237 CTCACGGATGCGCTGCCCGTCGCCCTGCTGGGCATGAACGCCAACCTCATGTGCCAGTAC 1057178
Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAA-AAGCACTATAATGT 102273
|| || || || || || || |||| | | || | | || ||| |||| || |
Sbjct 1057177 ATCGAGTTCGTCGCCGACCGCCTGCTGGTGGCTCTTGG-CAACAAGAAGTACTACAACGC 1057119
Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333
|||||||||||| |||||||| || || || ||| | ||||||||||| || ||
Sbjct 1057118 GACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCAACGGCAAGACCAACTTCTTCGA 1057059
Query 102334 AAAG 102337
|||
Sbjct 1057058 GAAG 1057055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583632307695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |