Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq6 109 1e-18 >seq6 Length=2952248 Score = 109 bits (120), Expect = 1e-18 Identities = 282/424 (67%), Gaps = 13/424 (3%) Strand=Plus/Minus Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978 ||||||| || || || || || |||||||| || || | ||||||||||| |||||| Sbjct 1057470 TTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCTTTCGCATCCATCTTCTGGC 1057411 Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038 ||||||| | ||| | |||| || || |||| ||| || ||| |||| || | |||| Sbjct 1057410 TCAAGAAGCGTGGTCTCATGCCCGGCCTTACCTTCTCGAACGAGCTCATCTCCCGTGACG 1057351 Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTT---GAAAAAGGGTTTTGTTGATACCC 102095 | || | || ||||||||| ||| ||||||| | | | | || || ||| Sbjct 1057350 AGGGAATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCACA----TCAAGTCGAAGCCC 1057295 Query 102096 CATCAAGAGAAAGGATTCTTGAA-ATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154 | ||| | || ||| ||| | || || || || || || | || || Sbjct 1057294 AGCCCTGAG---GCCGTCGAGAAGATTATTACCGAGGCTGTGGATATCGAGAAGGAGTTC 1057238 Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214 ||||| | | | ||||| || | |||| |||||| ||| | ||| |||||||| Sbjct 1057237 CTCACGGATGCGCTGCCCGTCGCCCTGCTGGGCATGAACGCCAACCTCATGTGCCAGTAC 1057178 Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAA-AAGCACTATAATGT 102273 || || || || || || || |||| | | || | | || ||| |||| || | Sbjct 1057177 ATCGAGTTCGTCGCCGACCGCCTGCTGGTGGCTCTTGG-CAACAAGAAGTACTACAACGC 1057119 Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333 |||||||||||| |||||||| || || || ||| | ||||||||||| || || Sbjct 1057118 GACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCAACGGCAAGACCAACTTCTTCGA 1057059 Query 102334 AAAG 102337 ||| Sbjct 1057058 GAAG 1057055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583632307695