Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq4 113 6e-20
>seq4
Length=4775223
Score = 113 bits (124), Expect = 6e-20
Identities = 244/363 (67%), Gaps = 4/363 (1%)
Strand=Plus/Minus
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081
|| || ||||| || || || |||||||| ||||| || || || | | |
Sbjct 4664026 ACACGCTTCATGAACAGGTCGGGAATCCAGAGAGCGTAGAACAGGTCACGCGCGCGGACT 4663967
Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141
||||| ||||| ||||| ||| |||||||| | | ||| | ||||||||
Sbjct 4663966 TCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAAACTGAACACATCGGCGTGCCACGGC 4663907
Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201
|| | ||| ||||| | | ||||| || ||||| || ||||| || | ||| | ||
Sbjct 4663906 TCAAGGTAGATGGCAAAGGCGCCCGGGCGCTTGTTACCGCCCTGGTCAACGTAGCGTGCA 4663847
Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261
||||| || || || | | ||| ||||| | ||||||| | || ||||| ||||
Sbjct 4663846 GTGTTGTTGTAGACGCGGAGCATGGGAATCAGACCATTGCTGGTGCCGTTGGTACCGGCA 4663787
Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAA--TTGATAGACCTATTCCCCCTGCCATTT 72319
|| ||||| || ||||||| || | | |||| |||| || || || || | |
Sbjct 4663786 ATGTAGCTGCCGGTGGCACGGATGCGGTGGACGTTGA--GACCGATGCCTCCAGCGGTCT 4663729
Query 72320 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA 72379
||||||| | ||||| || | ||| || ||||||||||| || || || ||| |||
Sbjct 4663728 TAGAGATCATGGCGCAGGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCA 4663669
Query 72380 TGT 72382
|||
Sbjct 4663668 TGT 4663666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138956712040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |