Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4 113 6e-20 >seq4 Length=4775223 Score = 113 bits (124), Expect = 6e-20 Identities = 244/363 (67%), Gaps = 4/363 (1%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 || || ||||| || || || |||||||| ||||| || || || | | | Sbjct 4664026 ACACGCTTCATGAACAGGTCGGGAATCCAGAGAGCGTAGAACAGGTCACGCGCGCGGACT 4663967 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 ||||| ||||| ||||| ||| |||||||| | | ||| | |||||||| Sbjct 4663966 TCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAAACTGAACACATCGGCGTGCCACGGC 4663907 Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201 || | ||| ||||| | | ||||| || ||||| || ||||| || | ||| | || Sbjct 4663906 TCAAGGTAGATGGCAAAGGCGCCCGGGCGCTTGTTACCGCCCTGGTCAACGTAGCGTGCA 4663847 Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261 ||||| || || || | | ||| ||||| | ||||||| | || ||||| |||| Sbjct 4663846 GTGTTGTTGTAGACGCGGAGCATGGGAATCAGACCATTGCTGGTGCCGTTGGTACCGGCA 4663787 Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAA--TTGATAGACCTATTCCCCCTGCCATTT 72319 || ||||| || ||||||| || | | |||| |||| || || || || | | Sbjct 4663786 ATGTAGCTGCCGGTGGCACGGATGCGGTGGACGTTGA--GACCGATGCCTCCAGCGGTCT 4663729 Query 72320 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA 72379 ||||||| | ||||| || | ||| || ||||||||||| || || || ||| ||| Sbjct 4663728 TAGAGATCATGGCGCAGGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCA 4663669 Query 72380 TGT 72382 ||| Sbjct 4663668 TGT 4663666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138956712040