Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq3 82.4 6e-11
>seq3
Length=5700105
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891
||||| ||||| || |||||||| ||||| ||||| |||| | || | |||||
Sbjct 1597754 CACCAAGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGACCATCCTC 1597813
Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951
|||||| ||||| || |||| || | |||||| ||| ||| | ||||| |||||
Sbjct 1597814 CAGCTGCTTACCAGCGAAAATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 1597873
Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011
|| || || || | | ||| || ||| || ||| |||| || ||||| ||
Sbjct 1597874 GATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCCACCTCGAGCGTGATGGTCTT 1597933
Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| || | || ||||| ||||| |||||
Sbjct 1597934 GCCAGTGAGGGTCTTGACGAAAATCTGCAT 1597963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414572653474426
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |