Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 6e-12 >seq7 Length=2119142 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/212 (71%), Gaps = 10/212 (5%) Strand=Plus/Plus Query 99561 GTTGAGCAGCAGCACGCCGCGGCGCGCCCA-GGCCTC--CAGGCAGCCGTGCTGCGGCCG 99617 |||||||| ||||||||| ||| |||||| ||| || ||| | ||| | || ||| | Sbjct 790673 GTTGAGCAACAGCACGCCACGGTCCGCCCACGGCGTCAACAGTCCGCCATTCTTTGGCGG 790732 Query 99618 CGGGGT---CCCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGAGGCTGGGCGG 99674 ||| | ||||||| | |||| | || | |||||| |||| |||| ||||| Sbjct 790733 CGGCTCAAACTCGGGGAACTGGTTCTTGAGCGCAGTGTAGATATTCTTGAGGGAAGGCGG 790792 Query 99675 GA-TCGGAACGCCGCGGTT-CACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGCTGTGG 99732 | | || | ||||| |||| |||| ||||| ||||| || || | ||||| Sbjct 790793 GGCTGGGGTTG--GCGGTCGCACGGAGAAGCAGAGGCCATGGGCTTGATTGTAGTTGTGG 790850 Query 99733 TAGGGGTCCTGGCCCAGGATGACGACCTTGAC 99764 |||||||||||||||| |||||| | ||||| Sbjct 790851 TAGGGGTCCTGGCCCAAGATGACAGCTTTGAC 790882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440899040174040