Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq3 89.7 1e-12
>seq3
Length=5700105
Score = 89.7 bits (98), Expect = 1e-12
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || ||||| | |||||| || || || || ||
Sbjct 1597995 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGACCGTCCTCCAGCTGCTTACCC 1598054
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481
|| || || || | ||| || || || || || || || || ||||||||| ||||| ||
Sbjct 1598055 GCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATC-TTGCTCTT 1598113
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | |||||| | || || || | || || ||||| || || || ||
Sbjct 1598114 GACGTTGTCGATGGTATCCGACGACTCAACTTCCAAGGTGATGGTCTTGCCGGTGAGCGT 1598173
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 1598174 CTTGACGAAGATCTGCAT 1598191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397972183532
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |