Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 1e-12 >seq3 Length=5700105 Score = 89.7 bits (98), Expect = 1e-12 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| || ||||| | |||||| || || || || || Sbjct 1597995 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGACCGTCCTCCAGCTGCTTACCC 1598054 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 || || || || | ||| || || || || || || || || ||||||||| ||||| || Sbjct 1598055 GCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATC-TTGCTCTT 1598113 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | |||||| | || || || | || || ||||| || || || || Sbjct 1598114 GACGTTGTCGATGGTATCCGACGACTCAACTTCCAAGGTGATGGTCTTGCCGGTGAGCGT 1598173 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 1598174 CTTGACGAAGATCTGCAT 1598191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397972183532