Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq6 95.1 1e-14
>seq6
Length=2952248
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701
|| ||| || || || || || || || || || |||||||| | || || ||||| |
Sbjct 1057037 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAGATGTTCTC 1057096
Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761
||| || ||||| || || | | |||| | | ||| | || ||| | | | || |||
Sbjct 1057097 CATGAAGTCGAAGGGGTTGGTCGCGTTGTAGTACTTCTTGTTGCCAAGAGCCACCAGCAG 1057156
Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820
|| || || || ||||||||||| | ||||||| | ||| | |||||||||| || |
Sbjct 1057157 GCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTTG-GCGTTCATGCCCAGCAGGG 1057215
Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869
|||| || | |||| || | ||| ||||| || || || || || ||
Sbjct 1057216 CGACGGGCAGCGCATCCGTGAGGAACTCCTTCTCGATATCCACAGCCTC 1057264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662226484880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |