Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 1e-14 >seq6 Length=2952248 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || || || || || || || || |||||||| | || || ||||| | Sbjct 1057037 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAGATGTTCTC 1057096 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | |||| | | ||| | || ||| | | | || ||| Sbjct 1057097 CATGAAGTCGAAGGGGTTGGTCGCGTTGTAGTACTTCTTGTTGCCAAGAGCCACCAGCAG 1057156 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820 || || || || ||||||||||| | ||||||| | ||| | |||||||||| || | Sbjct 1057157 GCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTTG-GCGTTCATGCCCAGCAGGG 1057215 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 |||| || | |||| || | ||| ||||| || || || || || || Sbjct 1057216 CGACGGGCAGCGCATCCGTGAGGAACTCCTTCTCGATATCCACAGCCTC 1057264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662226484880