Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4 289 7e-73 >seq4 Length=4775223 Score = 289 bits (320), Expect = 7e-73 Identities = 1037/1603 (65%), Gaps = 24/1603 (1%) Strand=Plus/Plus Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| ||| || ||||||| || || ||| || | |||||||| || | | ||||||| Sbjct 4663615 TGTTCAACGCCGGAACTCCCAAGCCGCAGCTGGCATCTTGCTTCCTCATCGACATGAAGG 4663674 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | || ||||||||| |||| ||||| || |||| || || | || || |||| | Sbjct 4663675 AGGACAGCATCGAGGGCATCTACGACACGCTCAAGACCTGCGCCATGATCTCTAAGACCG 4663734 Query 363689 CAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGG 363746 | || || || ||| | | || ||||| | ||||| || | ||| |||||| ||| Sbjct 4663735 CTGGAGGCATCGGTCTCAACG-TCCACCGCATCCGTGCCACCGG-CAGCTACATTGCCGG 4663792 Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || | ||||| ||| |||||||||| || || | |||| ||||| | Sbjct 4663793 TACCAACGGCACCAGCAATGGTCTGATTCCCATGCTCCGCGTCTACAACAACACTGCACG 4663852 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||||| |||||||| || |||||| || || ||||| || || || ||||| Sbjct 4663853 CTACGTTGACCAGGGCGGTAACAAGCGCCCGGGCGCCTTTGCCATCTACCTTGAGCCGTG 4663912 Query 363867 TCATGCCGATATTTTTGAGTTTCTT-GAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925 || |||||| | || |||||| | || || || || ||| ||||| |||||| | | Sbjct 4663913 GCACGCCGATGTGTTC-AGTTTCCTCGACCTTCGCAAGAACCACGGAAAGGAGGAAGTCC 4663971 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985 | || ||||| |||||||| || || ||| || | |||| || |||||||| || ||| Sbjct 4663972 GCGCGCGTGACCTGTTCTACGCTCTCTGGATTCCCGACCTGTTCATGAAGCGTGTCGAG- 4664030 Query 363986 CAGGTAAGAA-TTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 ||| | | |||| | ||| | ||||| ||||||| || ||||| | || || | Sbjct 4664031 CAGAACGGCACTTGGACCCTCATGTGCCCCAACGAATGCCCGGGTCTGGCAGACGTGTAT 4664090 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 || || || | | ||||| ||||| |||| || |||||| | || |||| Sbjct 4664091 GGCGAGGAGTTCGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGCCGTGGCCGCGAGACT 4664150 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 | | || |||||||| |||| || || | || | || | ||||| || | ||| Sbjct 4664151 GTCCGGGCGCAGAAGCTGTGGTACGCTATTCTCGAGGCTCAAGTCGAGACTGGCAACCCC 4664210 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | ||||||||||| || |||||||||||| ||||||| || | ||||| || ||| Sbjct 4664211 TTCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATT 4664270 Query 364225 CAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 | |||| | ||||| || |||||| | || ||||| || ||||| || ||||| Sbjct 4664271 C-GCAGCTCTAACCTTTGCTGCGAGATCGTCGAGTACACTGCCCCCGATGAAGTCGCCGT 4664329 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAG------ATGGTACTTTTGA 364337 || ||| | || || | || |||||| | || || | | | |||| || || Sbjct 4664330 CTGCAACTTGGCTTCCCTGGCTCTTCCGACCTTCGTGGACGTCGAGAACGGTATTTACGA 4664389 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCA--TGCTACTTGCAATCTCG-ACAAGGTTAT 364394 | | | | || | || || || ||| |||| | | || | ||||| | || Sbjct 4664390 CTTCAACAAGCTCCACGAGGTCAC---TCAGGTGCTTGTGAAGAACTTGAACAAGATCAT 4664446 Query 364395 CGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCGA 364453 ||||| || | || || | ||||| || || | | || |||||||| ||||| | Sbjct 4664447 CGACATCAACCACTACCCGGTGCCTGAGGCTAGAAAGAGC-AACATGCGTCACCGCCCCA 4664505 Query 364454 TTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATT 364513 ||| | ||||| | || || ||||| | || || ||| ||| | || || | Sbjct 4664506 TTGCGGTGGGTGTCAATGGTCTTGCTGATGCCTTCCTGGCTCTCCGCATGCCTTTCGACT 4664565 Query 364514 CGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGA 364573 | || || || || || | ||||||| || || || || ||| || | | Sbjct 4664566 CCCCCGAGGCCAAGCAGCTCAACATCCAGATCTTCGAGACCATTTACCATGCTGCCCTCA 4664625 Query 364574 CTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633 |||| ||| || | || || | | || || || | |||| |||| Sbjct 4664626 CTGCCTCGATCGAGCTTGCCAAGCTCCACGGTCCTTATGAGACGTTCCAGGGTAGCCCTG 4664685 Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693 || ||||| | |||||| || | ||||| || || | | | ||| ||| Sbjct 4664686 CCTCTCAGGGTATCCTCCAGTACGACATGTGGAACAAGACTCCCACCGATCTCTGGGACT 4664745 Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGC 364753 |||||| || || | || |||| |||| |||||||| || | || | Sbjct 4664746 GGGATAGCCTGAAGGCCGAGATTGCTCAGCACGGTATCCGCAACTCTCTGCTCGTCGCAC 4664805 Query 364754 CCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTA 364813 ||||||| || || || || ||||| || || ||||||||||||||| || | | Sbjct 4664806 CCATGCCTACTGCCTCGACGAGTCAGATTCTTGGTTTCAACGAGTGCTTCGAGCCTTACA 4664865 Query 364814 CAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACC 364873 || || | || || ||||| || || |||| ||||| | ||| || || | | Sbjct 4664866 CATCGAACATCTACTCTCGCCGCGTCCTGGCCGGTGAATTCCAGGTTGTCAACCCCTGGC 4664925 Query 364874 TAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCG 364933 | | ||||| | ||||| |||||| ||| |||| ||||||||| ||||||| Sbjct 4664926 TCCTGAAGGACTTGGTCGACCTCGGGCTATGGTCTGACCAGATGAAGAACCGCATCATCG 4664985 Query 364934 CCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACA 364993 | ||| ||||| | ||| ||||||| |||| || || | ||| | | |||| Sbjct 4664986 CTTCTAGCGGTTCCATTCAGCACATTCCCAACATTCCCGACGACATCAAGGCGCTCTACA 4665045 Query 364994 AAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTT 365053 | || || |||||| |||| ||| || || | | ||||| ||||| || ||||| | Sbjct 4665046 AGACTGTCTGGGAACTTTCTCAGCGCACCATCGTCCAGATGGCTGCCGACCGTGGTGCCT 4665105 Query 365054 TTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTA 365113 | || ||| ||||| | ||| | ||||| | || || | |||| ||| Sbjct 4665106 TCATTGACCAGTCGCAGTCCCTCAACATCCACATGAAGGACCCTACGATGGGCAAGATTA 4665165 Query 365114 CATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | || ||||| ||| || ||||| ||| || ||||| || Sbjct 4665166 CCTCTATGCACTTCGCTGGATGGAAGCTCGGCCTCAAGACCGG 4665208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353115722678